| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0097 |
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| Symbol | rmuC |
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| ID | 8709454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 115733 |
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| End bp | 117073 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646482218 |
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| Product | RmuC domain protein |
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| Protein accession | YP_003373364 |
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| Protein GI | 283782610 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.186787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATA ATATTGTGAT GTTTGTTTTA ATGGTGGTTG CTGTTGTAAT AACCGCCATT
GTTGTGCTGG CTATTGTTAA GCACAACTCT GGAACGCAAG GCGCTAATGG CGTAAACCAG
CGCGAATTTA ACGAATTGCG CTCGCAGTAT GAACAAGCGC GCGCTCAAGC TCAAGAAAAT
GGCAATCAGG CTATACGGTA TCGCACGCAA GCAGAGCAGC TTGCTGAGCG ATTAAAGTTT
GTTGAAGCAG AACTTGCTAA AGCGCAGCAG GCAGAGCAAT TGCGAGTGAA TCGCGAAGAA
CAATTGCGCG CAGAGCGAGA AGAACGCGAA CGGTTAAATC GTGAAAAAAC TTTGAAAGAG
CAAGGTAAAG TTTTGGAAGC GCTTGCTCCA GTAAAAGACA ATCTCGAAGC ATTGAAGAAT
AAAGTTTCGC AGATTGAAGA AGGGCGTAAG CAAGAAATGG GTGTGCTAAG CACTCAGCTT
AAAGGCCTAA GTGAGCAGCA AACAAGGCTT GACCGCGAAA CGAGTTCGCT TTCTGCAGCA
TTGCGAAATA ATAAGGTTCG CGGAGCTTGG GGCGAGGCTC AACTAAAGAA TATTGTTGAA
TCTGCAGGCT TGCTTGAGCA TGTTGATTTT GATACGCAGG TTGTTGTAAC TGGAGTAAAT
GGCGAACAGC AGAGGCCGGA TATGGTTGTG CATCTGCCAG GAGGCAAAAC AATTCCAGTT
GATGCAAAAG TTCCGTATGC GGATTATCAG CGCGCTTGCG AAATCCCAGA TAACGCAAGT
GACGAAGAAT TAGCTAGAAG GAGCGAGCTT CTAAAAGCGC ACGCTAAGGC TTTGCGAGAA
CACGTGCGAG TATTGGGAGC TAAAGCGTAT TGGCAGGCTT TTGAAACAGC GCCAGATTTT
GTAGTTGCAT TTATTCCAAA CGAAGCGTTG CTTCAGGCAG CTCTTGAAGC GGATCCAACG
CTTATGGATG ATGCTTTTGC GCAAAAAGTA GCACTTACTT CACCAGTTAC TTTGTGGGCT
GTGCTTAAGT CTGTTGCGTA CGCATGGCAG CAGCAAAGTC TTACAGATGA TGCAAAAGAA
CTTTTCGATT TATCTCGAGA ATTATATGAT CGCTTTGCGG TTCTTGGGGA AAATGCTTCA
AAACTTGGCG TATCTTTGGC AAGAACAGTT GCAGCTTACA ATAAGTTTGC TTCTTCGCTT
GAGTCGCGAG TGTTGGTAAC AGCGCGTAAA CTTCAGAAGT TAGACCAAAG TAAAGTTATT
GCTTCAATAG ATCTTATAGA TTCCGATAAA GCTGACGTTA AAGAGCTGAG CGCTCCAGAA
GTATCAGTAG AAGATCGTTA A
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| Protein sequence | MFDNIVMFVL MVVAVVITAI VVLAIVKHNS GTQGANGVNQ REFNELRSQY EQARAQAQEN
GNQAIRYRTQ AEQLAERLKF VEAELAKAQQ AEQLRVNREE QLRAEREERE RLNREKTLKE
QGKVLEALAP VKDNLEALKN KVSQIEEGRK QEMGVLSTQL KGLSEQQTRL DRETSSLSAA
LRNNKVRGAW GEAQLKNIVE SAGLLEHVDF DTQVVVTGVN GEQQRPDMVV HLPGGKTIPV
DAKVPYADYQ RACEIPDNAS DEELARRSEL LKAHAKALRE HVRVLGAKAY WQAFETAPDF
VVAFIPNEAL LQAALEADPT LMDDAFAQKV ALTSPVTLWA VLKSVAYAWQ QQSLTDDAKE
LFDLSRELYD RFAVLGENAS KLGVSLARTV AAYNKFASSL ESRVLVTARK LQKLDQSKVI
ASIDLIDSDK ADVKELSAPE VSVEDR
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