| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0095 |
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| Symbol | |
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| ID | 8709308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 113401 |
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| End bp | 114957 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 646482216 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373362 |
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| Protein GI | 283782608 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.124785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCAAT ATTCTAACTT TTTAACTGAA TTCAGATTTT TTACGAAAAG TCATAAGAAG
TGCACAATTA TTTCACGTAT TATGTACCCA TTATCTCTAA TAAGCAGTTG TATTTTTAGC
TTATTTTTGA TTGCATATCC TATTTTTTTG GGTGTGGCAA ATTTTTTAGC GCATAATAAT
AATTATGCGC TTTGGTTAAG AATTGATGTC ACGTGGATGC ATTGTTTGTC TGATATTGTT
GCTTGCATTT TTGGCGCATG GTGTTCATGT AAAGCTTGCT CGCCTAGATG TTTGGTTAAT
CCTGCGTGGT GTGCAGGAAA ATCAGCCAGT CGTTACGCTA TTCCTATACT AAAAGGCGCT
ATACTGTGCA GTTTGTTATA TTGCGTCAGT ATATTGCCAA CAGTAATTCA GAGTGATGTA
AATATTACAA ATTTTCCGTA TTTTCCACTA TTATGTGGAG GCGTGACGCC AAGTGCATTT
TTTGCAATTG GTTTTACTTT AGGAGTAATT ATTGGCAATC GTTGGGCAAT TGTATTCTCA
GCTTTATTAT CTTTTGCAAT AATTTGGTGC TGTATTTATG GCGTCATTAT AATGCGTAAT
GGCACCATAC CTCAAGGAGA TATTTTTCCT AGATATTGGG GTAGTAGTTT ATACGCAATA
CTTCCAGTGT CGGATGCTGG TATTGGTGCT GAGCCTGGTT TGCGTATGAA CCCATGGTTG
GTGACTTTGC GCATATTCTT TGTGTGTGTT GTTATCGTTT CATGCATTCT TTGTTGCGCG
CATATTAGAT ATTTTTGGCA AAAGGGATCT TATTGGTGCA TAAAAGCAAT AAGTCTTTCT
TTAATTATGC CAATAGTATG TGCTTGTTGT ATAGCTATGT GGGGTCCAAA ACCTTGGATT
CGCTCTGGAC CTTTTGTGCC TCAGTGTACG ACGTTTAAAG ATACTGCTTT TTCTGTTTGT
GTACATCCTG AAGAAGCTTA TATTCGTAAA CTTCGTGCTG TTAAACATTT GAAAACTGTT
GCTTCTTGGT TTCCTAAGAA TCAGAGAGAT TCGCAAGGCA AAGGAATTGT GCTTGTACTG
GGGAATGCGT TTACTCCAAC AAATACTGAA AAATCTTGGA ATCTTACTAA TAGTGGTTTA
ATAAAGTTAC GTAATCTTAA AGCTACTGTT ATTCAACAAC AAACAGATAC ATTTGTTAGG
CGTTCTGAGA AATATGGTGA TATGACTGGT ATCGCTCAAG AAGTGTTACA AAGATTTGTG
CCTGCAAAAT GTGCATCAAG TGCTATGAAA GAAGTATATG TAAAAAAGAA TCTTGATTCA
AACGCTTCTG TTACAGCATT TTTGCTTGCT CAGCTTCCTT CTCGTATAAG TAATGATGTG
TATGGGTCAT ATGGATTTAT TCCAGGTGAA GCAAACGATA AAGTGGCTAT GAGTATTAAT
AATGCTGATG ATGCTAAGCT GAAACAATTT GTAAAAAATC ATGTTAAAGA ACTTAATCAA
TGCCGCATAA CTCCACAACA AGTCTTATCG GAACTTGGTG ATAAGCATGA AAAATAA
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| Protein sequence | MRQYSNFLTE FRFFTKSHKK CTIISRIMYP LSLISSCIFS LFLIAYPIFL GVANFLAHNN
NYALWLRIDV TWMHCLSDIV ACIFGAWCSC KACSPRCLVN PAWCAGKSAS RYAIPILKGA
ILCSLLYCVS ILPTVIQSDV NITNFPYFPL LCGGVTPSAF FAIGFTLGVI IGNRWAIVFS
ALLSFAIIWC CIYGVIIMRN GTIPQGDIFP RYWGSSLYAI LPVSDAGIGA EPGLRMNPWL
VTLRIFFVCV VIVSCILCCA HIRYFWQKGS YWCIKAISLS LIMPIVCACC IAMWGPKPWI
RSGPFVPQCT TFKDTAFSVC VHPEEAYIRK LRAVKHLKTV ASWFPKNQRD SQGKGIVLVL
GNAFTPTNTE KSWNLTNSGL IKLRNLKATV IQQQTDTFVR RSEKYGDMTG IAQEVLQRFV
PAKCASSAMK EVYVKKNLDS NASVTAFLLA QLPSRISNDV YGSYGFIPGE ANDKVAMSIN
NADDAKLKQF VKNHVKELNQ CRITPQQVLS ELGDKHEK
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