Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0093 |
Symbol | |
ID | 8709760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 112188 |
End bp | 112514 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 646482214 |
Product | hypothetical protein |
Protein accession | YP_003373360 |
Protein GI | 283782606 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0308366 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGCAA AGAAAGGATT TGCAATAGTT GCGCTTGCTG CTATTGTTTA TGCTGTGCCA ATGTCAGCTT ATGCTCAGAT GAGTGGTTCT GTAGTTGGAA TAGACAGAGA AAGTATACCT TGTGCGGCTA GTGTTCATAA TAATCAAGCA AAGTTGGTAT GCCATCATTC TCCAAAATTT GTGCGTGCGA GAATAGCTTG CCGTTTTTGG CCAGATCAAC TTACTAATTG GATAAAAGAT GGCGTTGAAT ATTCTGGTGG CTGTATTTTT GGGGTTAATG ATACTCCTAG TGGCAACCCT GTCACCATGG AAGTTGGAAG TAATTAG
|
Protein sequence | MFAKKGFAIV ALAAIVYAVP MSAYAQMSGS VVGIDRESIP CAASVHNNQA KLVCHHSPKF VRARIACRFW PDQLTNWIKD GVEYSGGCIF GVNDTPSGNP VTMEVGSN
|
| |