Gene HMPREF0424_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0093 
Symbol 
ID8709760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp112188 
End bp112514 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content41% 
IMG OID646482214 
Producthypothetical protein 
Protein accessionYP_003373360 
Protein GI283782606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0308366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCAA AGAAAGGATT TGCAATAGTT GCGCTTGCTG CTATTGTTTA TGCTGTGCCA 
ATGTCAGCTT ATGCTCAGAT GAGTGGTTCT GTAGTTGGAA TAGACAGAGA AAGTATACCT
TGTGCGGCTA GTGTTCATAA TAATCAAGCA AAGTTGGTAT GCCATCATTC TCCAAAATTT
GTGCGTGCGA GAATAGCTTG CCGTTTTTGG CCAGATCAAC TTACTAATTG GATAAAAGAT
GGCGTTGAAT ATTCTGGTGG CTGTATTTTT GGGGTTAATG ATACTCCTAG TGGCAACCCT
GTCACCATGG AAGTTGGAAG TAATTAG
 
Protein sequence
MFAKKGFAIV ALAAIVYAVP MSAYAQMSGS VVGIDRESIP CAASVHNNQA KLVCHHSPKF 
VRARIACRFW PDQLTNWIKD GVEYSGGCIF GVNDTPSGNP VTMEVGSN