| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0084 |
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| Symbol | ppk |
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| ID | 8709254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 100273 |
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| End bp | 102510 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646482205 |
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| Product | polyphosphate kinase 1 |
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| Protein accession | YP_003373351 |
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| Protein GI | 283782597 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0855] Polyphosphate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000685763 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTACAAA TTTTTGACGC TCCCTCAAAG GCGATACTGC GCGGTCAAAT TGCCGAACAC
ATCGCCGAAG ATGAAAAGGC AGAAAAGCGT GAAGCTCGTG AGGGTGAGCT ACCGTTGCCA
AAAGATCGTT TCTTCGACCG AGAATTAAGC TGGTTGAAGT TCAATCGTCG CGTGCTCGAG
TTGGCTCAGA ATACAGATTT GCCACTTCTT GAACGCGCTA ATTTTGCTGC TATCTTTGCG
TCAAATCTCG ACGAATTCTT TATGGTTCGA GTTGCAGGAT TAAAGCGCAG AATAGATTCT
GGAATAGCAG TAACTGCAGC ATCCGGCTTA AGCCCTCGTC AGCAATTGCG CGCTATTAGT
GAAGTAACTC ACCGCCGTCA AGATGAGCAC GCTCACTATG TTATTGAGCA CATTCTTCCT
GAGCTTGCCA AACAGCGCAT TGTGTTGCTC AGCTGGGATA AGCTTACAGA ATCAGAAAAA
GCACGTTTGT CTGATTACTA CAAAAAGCAA GTATTCCCTG TTCTTACGCC TCTTGCAGTG
GATCCTGCTC ACCCATTCCC GTACATTTCC GGCAAGTCTA TTAACTTGGC TGTTATCGTC
GAAAATCCAA ATTCTGGAAA GTCACATTTT GCTCGCGTAA AGATTCCAGA TAATTTGAAT
CGCCTTGTAC CAGTTGACGA TTTAACAGAC GAAGAAGGTC GTGAAGAGCG TTACGGCTTC
ATCACTATGG AAAAGCTGAT TGCAGCACAC TTGGAATCAC TTTTCCCAGG AATGATTATT
AAGGAAGCTC GCTCTTTCCG CGTTACGCGT AACGAAGATA TTGACGTTGA GGAAGACGAT
GCAGAAAACT TGCTTAACGC TATGGAGAAG GAACTTCTTC GCCGCCGCTT TGGGCCGCCA
ATTCGTTTGG AAATTTCTAA CGAGGCCAGC CCATTCCTTT CTCAGCTTCT TGCAAATCAA
CTTCGCGTAA GCCCTGAGGA AGTCTATCGC TTGCCTTCGC CGCTTGATAT GACGGTATTG
TTTGAATTGC AGGCGCTTGA CCGCCCAGAT TTGAAGTATC GTCCGTTTAT TCCTACTACG
AACCGTCAGA TTGCAGAAGT TGAAACTAGC CACGCTCAAG ATATTTTCGC TTCTATTCGC
GAGCATGACA TTTTGTTGCA TCATCCTTAC GATTCGTTCT CTACTTCTGT ACAGGCATTC
CTCGCGCAGG CTGCTGCAGA TCCAAAAGTG CTTGCAATTA AGCAAACTTT GTATCGTACG
TCTAGCAATT CGCCAATTAT TGACGCTCTT GTTGATGCGG CTCACGCTGG CAAGCAGGTA
CTTGCACTGG TTGAGATTAA GGCACGATTT GACGAGGATG CAAATATTGC TTGGGCTCGT
AAGCTTGAGC GCGCAGGCGT TCACGTTGTG TACGGCATTG TTGGTTTGAA AACTCACTGC
AAGCTTTCGC TGGTTGTTCG CCAAGAAGCC GAAGGATTGC GCCGCTACTG CCACGTTGGT
ACAGGTAATT ACAATCCTAA GACTGCTCGC CTTTACACGG ATTTGGGATT GCTTACTTGC
GATCCTGTAG TTGGCCAGGA TTTGACTCGC TTGTTTAACC AGCTTTCCGG TTATGCTCCA
AAGTCAAGCT TCCATCGCTT ACTTGTAGCT CCACGAACCG TTCGCACTGG CATTATTCAG
CGTATTCGCC GCGAGGAAGC CGCAGCTCTT GCTGGCAAGG AAGCGTGGAT TAAGATTAAG
GTCAATTCCG TAGTTGATGA GCAAACTATT GACGCTTTAT ACCGTGCTTC TCAAGCTGGC
GTGAAGATTG ATATTGTTGA GCGTGGAATT TGCTCACTGA AGCCTGGCAT TGAGGGATTG
AGTGAGAATA TTCGCGTTCG TTCTATTCTT GGTCGATTCC TTGAGCACAG CCGTATTTAC
GCGTTCGCTA ATTCTTGTGG CCCGCAGATT GGTGACGGTC CTGCAAGTGG TCCAGAAGTG
TGGATTGGCT CTGCAGATTT GATGCACCGC AATCTTGATC GTCGAGTTGA AACCCTAGTT
CGCATTACTG CGCCTGATCA AGTTGAAGCA TTAATTCAGT ATATTGATTT GCAAATGGCT
GATTCAACTG TTTCGTGGTG GATGGATGGC GACGGCACGT ATACCTTGCA TTCTCGTGAT
AAGGAAGGTC GTCCGCTCGT TGACAGCCAG GCTTACTTGA TTCATACTCA CACGCGTAAG
CCTCGCGGTG CGAACTAA
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| Protein sequence | MVQIFDAPSK AILRGQIAEH IAEDEKAEKR EAREGELPLP KDRFFDRELS WLKFNRRVLE
LAQNTDLPLL ERANFAAIFA SNLDEFFMVR VAGLKRRIDS GIAVTAASGL SPRQQLRAIS
EVTHRRQDEH AHYVIEHILP ELAKQRIVLL SWDKLTESEK ARLSDYYKKQ VFPVLTPLAV
DPAHPFPYIS GKSINLAVIV ENPNSGKSHF ARVKIPDNLN RLVPVDDLTD EEGREERYGF
ITMEKLIAAH LESLFPGMII KEARSFRVTR NEDIDVEEDD AENLLNAMEK ELLRRRFGPP
IRLEISNEAS PFLSQLLANQ LRVSPEEVYR LPSPLDMTVL FELQALDRPD LKYRPFIPTT
NRQIAEVETS HAQDIFASIR EHDILLHHPY DSFSTSVQAF LAQAAADPKV LAIKQTLYRT
SSNSPIIDAL VDAAHAGKQV LALVEIKARF DEDANIAWAR KLERAGVHVV YGIVGLKTHC
KLSLVVRQEA EGLRRYCHVG TGNYNPKTAR LYTDLGLLTC DPVVGQDLTR LFNQLSGYAP
KSSFHRLLVA PRTVRTGIIQ RIRREEAAAL AGKEAWIKIK VNSVVDEQTI DALYRASQAG
VKIDIVERGI CSLKPGIEGL SENIRVRSIL GRFLEHSRIY AFANSCGPQI GDGPASGPEV
WIGSADLMHR NLDRRVETLV RITAPDQVEA LIQYIDLQMA DSTVSWWMDG DGTYTLHSRD
KEGRPLVDSQ AYLIHTHTRK PRGAN
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