| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0071 |
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| Symbol | |
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| ID | 8710069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 83773 |
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| End bp | 84033 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482192 |
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| Product | glutaredoxin |
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| Protein accession | YP_003373338 |
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| Protein GI | 283782584 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0695] Glutaredoxin and related proteins |
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| TIGRFAM ID | [TIGR02200] Glutaredoxin-like protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00875586 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCAGATC AGCCTACCGT AAATGTATAC GGTGCAGATT GGTGTGGAGA TTGCAAACGT
GCGAAAGCTG CGCTAATCCA GTATGGTGTG GCATTCGTTT GGCACGATAT TGAAACAGAA
GAGGGTGCTG AAGAAAAAGC GATTGAAATT AGCAATCAAA AGCATATTCC AGTTGTTACT
TTTGCAGATA ATACTTTTAT GGTTGAGCCA TCAGCAACAC AAATAAAAGC AAAACTTGAG
TCACTCGGAA TACTGCAATA A
|
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| Protein sequence | MSDQPTVNVY GADWCGDCKR AKAALIQYGV AFVWHDIETE EGAEEKAIEI SNQKHIPVVT
FADNTFMVEP SATQIKAKLE SLGILQ
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