| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0067 |
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| Symbol | |
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| ID | 8709182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 79485 |
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| End bp | 80444 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482188 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373335 |
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| Protein GI | 283782581 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1651] Protein-disulfide isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0337879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAAC AACAAGAAAC AACAAATAAT GAAATGCAAA AATCAAATAC CCCTTATAGT
AAAAGCTTAA TTGGCATCGT AATAGCACTA ATTATTCTTG CATTCGCTGC AGGAGCTGGG
TTTATGACTT ATTACAATTC AATCAATAAA CCACAAGTAA AAATTGAAAA TCCAACAACC
AATAAGCCAG ATACACAAAC TGAGGATACA GCAGACTCCC AAATAACCAA AGAGATTAAA
AAATTGCCTT CTTCTGACAT CCCACCAGCA TCTAATTTAC AAGGCGGAAT TCTTCTTAGC
AAGGATGGGT ACGGCAAGCA AGCTGCTGGT GCTCCTACAG TTGCCACTTA TTTTGATCCT
TTGTGCCCTG GTTGCGGATC CTTTAATCGT ACTGTTGATG AAACTTTAAT TAAAATGGTT
GAAGCAGGTC AAATTAACCT AGAACTTCAC CCAATGTCAT TCTTAAATCG TTTTAGCTCA
GATCAATATT CTTATCGCGT CTCAGGCGGT ATTGCCTATA TCGCTTCGCA CGACAACGAT
CCAAAGCATT TGCTTAAGTT CATCAATAGT ATTTTTAGCG AAAGATTCCA GCCGGAAGAA
GGCGACGGAT ACCAAGCAAC ACCAAATAAA GCTCTTATTG ATTTAGCTGA AGATGCTGGA
GTTGCAGATA AGATTGCGAA TGAAGCATTT AACTTACACT ATGTTAAGTG GCAAGAAGTT
ATTAATGAGA ATACTCCAGA AGAAAAAGCT TTATGGAATG TTTCTGGCTC TAATAAAGGC
GCTATGACAA CTCCAACAGT AACAATTAAC GGTAAGCTAG TAGATCTCAA TGCAGCTTCT
GAAAAGCAAA TGGATCCTTT GGAAGCTATA TTAAAGTCTT TGGGAATCGA TAAAAAACAT
GTTGGCAAAT CTGGTCATAT GCCGAAAGTT ACGTATAAGA GTAAGCCGCT TGATTTATAA
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| Protein sequence | MDQQQETTNN EMQKSNTPYS KSLIGIVIAL IILAFAAGAG FMTYYNSINK PQVKIENPTT
NKPDTQTEDT ADSQITKEIK KLPSSDIPPA SNLQGGILLS KDGYGKQAAG APTVATYFDP
LCPGCGSFNR TVDETLIKMV EAGQINLELH PMSFLNRFSS DQYSYRVSGG IAYIASHDND
PKHLLKFINS IFSERFQPEE GDGYQATPNK ALIDLAEDAG VADKIANEAF NLHYVKWQEV
INENTPEEKA LWNVSGSNKG AMTTPTVTIN GKLVDLNAAS EKQMDPLEAI LKSLGIDKKH
VGKSGHMPKV TYKSKPLDL
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