| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0054 |
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| Symbol | trxB |
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| ID | 8709517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 62789 |
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| End bp | 63730 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482177 |
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| Product | thioredoxin-disulfide reductase |
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| Protein accession | YP_003373325 |
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| Protein GI | 283782571 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATA AACTTCGAAA AGTTATCATA ATTGGATCCG GACCTGCAGG ATACACTGCT
GCAATATATT TGGGTCGCGC TGGGTACAAA CCACTTGTTA TTGCTGGAGC TCTTACTCCA
GGCGGTCAAT TGATGAACAC AACGGAAGTA GAGAATTATC CAGGATTCCC AGAAGGTATT
TTAGGCCCTG ACTTAATGGA ATCTATGCAA AAACAAGCTG AAAAATTTGG CGCAGAAGTA
TTGCTGAACG AGGTCGCTTC TGTAGACTTT AAAAGCGCTG TAAAGCTCGT TACTACCGAT
GACGGTATAA CTTATGAGTC CGACGCAGTT ATTGTCTCTA CGGGCTCGCA AGTGCGCAAA
TTGGGTGTTC CAGGAGAACT CGAGTACTCC GGCAGAGGTG TATCTTATTG CGCAACTTGT
GACGGCTTCT TCTTCCGAGG AAAACCAATT ACTGTAGTTG GTGGAGGAGA TTCTGCTTTT
GAAGAAGCAT TGTTCCTCAC ACGATTTGGT TCTTCTGTTA CTTTAATTCA CCGCAGAGAT
GAATTCCGCG CTTCAAAGAT TATGGTTGAC AGAGCAAAAG AAAACGAAAA AATCAAATTT
ATTACAAATA GCGTTGTAGA TGAAGTGCAC GGCAACGATG TAGAAGCTAC TTCACTTACT
GTTCGCAATG TTATTACAGG AGAAACTCAA GAAGTTGAGT CAGCTGGATT GTTTGTGGCA
ATTGGTCACA CTCCTGCAAC AAAGTTCTTA AACGACCAAT TAAAACTTAA TGAAGATGGA
ACAATTGTTG TTGATGGTGC AACTACTCGC ACTTCTGTTG AAGGCGTTTT TGCTGCGGGA
GATGTTGTCG ACAACATGTA TCGTCAAGCA ATTTCTGCAG CAGGAATGGG ATGCAGAGCA
GCTCTTGATG CTCAAACTTA TCTTAACGAA AAATACGCTT AA
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| Protein sequence | MENKLRKVII IGSGPAGYTA AIYLGRAGYK PLVIAGALTP GGQLMNTTEV ENYPGFPEGI
LGPDLMESMQ KQAEKFGAEV LLNEVASVDF KSAVKLVTTD DGITYESDAV IVSTGSQVRK
LGVPGELEYS GRGVSYCATC DGFFFRGKPI TVVGGGDSAF EEALFLTRFG SSVTLIHRRD
EFRASKIMVD RAKENEKIKF ITNSVVDEVH GNDVEATSLT VRNVITGETQ EVESAGLFVA
IGHTPATKFL NDQLKLNEDG TIVVDGATTR TSVEGVFAAG DVVDNMYRQA ISAAGMGCRA
ALDAQTYLNE KYA
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