| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0053 |
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| Symbol | |
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| ID | 8709728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 61313 |
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| End bp | 62665 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 646482176 |
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| Product | ParB-like protein |
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| Protein accession | YP_003373324 |
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| Protein GI | 283782570 |
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| COG category | [K] Transcription |
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| COG ID | [COG1475] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGAA ATAAGTCTCG CCTGGGTAAA GGTTTAGGTG CTTTGTTCCC AGCTTTGCCT
GGCGAGGATG CGCTTGCCGA TGCATCTAAT AATTTGCAAT TTAATGTTTC ACATGAAACA
AAAAAATCCG AATCTGTGGA TAGTCAATTA GAAGAACAAG CAAAAGTTTC ACGTGAAACG
TTACATAAAG ATAATAATCA ATCAAAAAAT GTTTCACATG AAACAAAGGT CCCTAGTATG
AGCAATTCAA TTGCTCCTCA CGCGGATAAG AGTAATAACA AAATAAAGAA TGTTTCACGT
GAAACCGTGC CGTCAATTCA TACTAACAAG CATTCTCATA AACGTTCAAC TATGCCATCT
CTTGGAGATG TCACTAGACC TATGGATTTC TTTTTTGGAG ATTCAGCATC AACGACATTT
ATGTCGTCTA AGGCAAAAAA TAATGAAGAA ACCGTTATTG GTGAAAAAAA TAACGCTGCT
GAAAAATCGA ATAAAACCGC AAAAAATGAG CCTTTGAAGC CAGTAAAAGG TGGATATTTA
GCTTATCTTA AGCCGTTAGA TATTGTTCCT AATGCGCATC AACCTCGAAC AATTTTTGAT
GAAGATGAGC TGCGAGAACT TGCGTCATCT ATTAAAGAAG TCGGCGTTTT ACAGCCTATA
GTTGTGCGAC CTATTGTTGA TGCAGATAAA AATGATGAAC AAATTGCACA TTATGAACTT
ATTATGGGCG AGAGAAGATG GCGTGCTTCT CAGCTAGCTG AACTTGATAC AGTTCCAGCG
ATTGTGCGCA CAACTGCTGA TGAAAATATG TTAAGAGATG CATTGCTTGA AAATCTTCAT
CGCGTTGCTC TTAATCCTCT TGAAGAAGCG GCAGCATATT CTCAGATGAT AGATGATTTT
GGTTTAACAC AGATTCAGCT TTCTCAGTCT GTATCAAAAT CACGTCCACA AATTGCTAAT
ACTTTAAGAC TTCTCAATCT TCCTGCTAGC GTGCAAAAAC ATGTCGCCTC AGGCGTGCTT
TCTGCAGGTC ACGCACGAGC ACTACTTGGC TTGGAAAATC CAGAAGATAT GGAGAGTCTA
GCCAATCGCA TTATTGCAGA AGGATTGTCA GTTCGTAGTA CTGAAGAGAT TGTTTCGTTG
AAGAATGAAG ATACATCTCA TGGAGCAGTA CGTACGCGTG TGCGTCGCAA TAATCAGTGG
TCTTCTTCGC CTGTGCGCAA GCAGCTTGAG GAGCATTTTG CTACCAAAGT TTCTATTAAG
GGCACAGAAA ATCATGGAAG AATCGAGATT GTCTTTTCTT CTCCTGAAGA AATGCAACGA
ATTATTGGTT TACTTGTTTC TAAAAAAGAA TAG
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| Protein sequence | MSGNKSRLGK GLGALFPALP GEDALADASN NLQFNVSHET KKSESVDSQL EEQAKVSRET
LHKDNNQSKN VSHETKVPSM SNSIAPHADK SNNKIKNVSR ETVPSIHTNK HSHKRSTMPS
LGDVTRPMDF FFGDSASTTF MSSKAKNNEE TVIGEKNNAA EKSNKTAKNE PLKPVKGGYL
AYLKPLDIVP NAHQPRTIFD EDELRELASS IKEVGVLQPI VVRPIVDADK NDEQIAHYEL
IMGERRWRAS QLAELDTVPA IVRTTADENM LRDALLENLH RVALNPLEEA AAYSQMIDDF
GLTQIQLSQS VSKSRPQIAN TLRLLNLPAS VQKHVASGVL SAGHARALLG LENPEDMESL
ANRIIAEGLS VRSTEEIVSL KNEDTSHGAV RTRVRRNNQW SSSPVRKQLE EHFATKVSIK
GTENHGRIEI VFSSPEEMQR IIGLLVSKKE
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