| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0052 |
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| Symbol | |
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| ID | 8709144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 60342 |
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| End bp | 61313 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482175 |
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| Product | sporulation initiation inhibitor protein Soj family protein |
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| Protein accession | YP_003373323 |
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| Protein GI | 283782569 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1192] ATPases involved in chromosome partitioning |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAATCAG CTGCTGAAAC GATTCAACGA ATTTTTGGAG ATTCAAAATC CTCCCTAGGT
ATTGAATTGG CAGATTTGAC ATCTCGTTTT CATTCCATTG AACAAGCGAA ATATCCTAAG
CCTAAGCAAA CGCGTTTTAT TGCTGTTGCT AATCAAAAAG GTGGAGTAGG AAAAACAAGT
TCTGCTGTAA ATCTTGCTGC AGCTATGGCA GTAAGTGGAT CAAAAGTACT TCTTATTGAT
ATGGATCCAC AAGGGAATGC GTCAACTGCA TTAAATACTC CTCATGCTTC TGGTAATTTG
TCGGTTTACG ATGTTCTTGA AGAGCGAAAA AGTATCGCTG AAGTAAAACA TGCTTGCCCA
GATATTGAAG GACTTGATGT TGTGCCAGCA TCCATTGATT TAAGTGGTGC TGAATTAGAG
CTTGCAGATA TGGATAATCG TAATAATCTG TTAAAGGATG CCTTGCAAGA ATATCTTGAT
AATAGCAGCG AACATTACGA TTATGTTTTT ATTGATTGTC CTCCGTCGCT TGGCTTGTTA
GTGATTAATG CCATGTGTGC AGCACGTGAA ATGCTTATAC CAATTCAAGC TGAGTATTAT
GCTCTTGAAG GTTTAGGACA GCTTATAAGA ACTATTGGTT TAGTCCAGCA ACATTACAAT
CCAATTTTAG TTGTTTCTAC AATGCTTGTT ACTATGTTTG ACAAGCGAAC TTTATTAGGC
AGAGAAGTTT TCCAAGAAGT TAAAAAACAT TATCCAAATA TTGTGCTTGA GACTACGATT
CCTCGTACTG TGAAAATACC TGAAGCGCCA AGTTTTAACC AAAGTGTTAT TACTTATGAT
CCTCATGGAT CAGGAGCGAT TTCTTATCGC GAAGCTGCGT TAGAAATAGC GAAAAGGTCT
AAGACAGTAT TATCTGTTAT TGCAGCAAAG CAAGATGCTA ATCGACAAGA ACAACAACAG
GAGAATCAAT AA
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| Protein sequence | MESAAETIQR IFGDSKSSLG IELADLTSRF HSIEQAKYPK PKQTRFIAVA NQKGGVGKTS
SAVNLAAAMA VSGSKVLLID MDPQGNASTA LNTPHASGNL SVYDVLEERK SIAEVKHACP
DIEGLDVVPA SIDLSGAELE LADMDNRNNL LKDALQEYLD NSSEHYDYVF IDCPPSLGLL
VINAMCAARE MLIPIQAEYY ALEGLGQLIR TIGLVQQHYN PILVVSTMLV TMFDKRTLLG
REVFQEVKKH YPNIVLETTI PRTVKIPEAP SFNQSVITYD PHGSGAISYR EAALEIAKRS
KTVLSVIAAK QDANRQEQQQ ENQ
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