| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0040 |
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| Symbol | gyrA |
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| ID | 8708757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 45488 |
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| End bp | 48118 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482163 |
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| Product | DNA gyrase, A subunit |
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| Protein accession | YP_003373311 |
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| Protein GI | 283782557 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTAGACG AAATAAATTC CGCTCGTGAT GATGCTGAGC GAGATCAGCT TCCAGATGGT
TCTATGGAAC CACAGAGCCC TCAGGAAGCA GATAATACTG ATTATGGCTT AATGAAGGGT
GCTCGCGTAA AGAACATGGA TTTGCAGCAG GAAATGCGCG AATCTTATTT AGCTTACGCA
TTATCTGTTA TTGTTGAGCG TGCTTTACCA GATGTTCGTG ATGGTTTAAA ACCTGTTCAC
CGTCGTGTTA TTTATGCAAT GTATGATGGA GGATACAGGC CTGATCGCGG ATATAACAAG
TGTTCTCGCG TTGTCGGTGA TGTTATGGGT AAGTATCACC CTCATGGTGA TTCTGCTATC
TATGACACTT TAGTGCGTAT GGCTCAGTCT TGGTCAATGC GCTATATGCT TGTTGATGGT
CAAGGAAACT TTGGTTCTCC TGGTGATGAT CCTGCAGCAG CAATGCGTTA TACGGAATGC
CGTATGGCAC CGTTGGCTAT GGAAATGGTA CGAGATATCG ATAAAGATAC CGTTGATTTC
CTGCCAAATT ATGATGGTAA AACTCAAGAG CCTACGGTTT TGCCAGCTCG TTTCCCGAAT
CTTTTAGTTA ATGGTTCTGC TGGTATTGCT GTTGGTATGG CAACCAATAT TCCACCTCAT
AATATGCGTG AAGTGGCTGA TGGTGTGCAC TGGGCGTTGG ATCATCCTGA TGCAAGCAAA
GAAGAACTTC TTGAAGCTTT AATTCAGCGA ATTAAAGGAC CTGATTTCCC TACTGGAGCA
ACAATCTTAG GTCACAAGGG AATTGAGCAA GCGTACCGCA CAGGTCGCGG CTTAATTACA
ATGCGAGCAG TAGTTAATAC TGAGGAAATT AAGGGACGCA TGTGCTTGGT TGTTACCGAG
CTTCCATACC AAGTTAATCC TGATCGCTTA GCTGCTTCTA TTCGTGAAGC TGTACGAGAT
GGCAAAATTC AAGGTATTGC AGATATGCGC GACGAAACGT CTGGTCGTAC TGGTCAGCGT
TTGGTTCTTG TTCTTAAGCG TGATGCTGTT CCAAAAGTTG TTTTAAATAA TTTGTATAAG
CATTCGCAAT TGCAGCAAAC TTTCGGCGCA AATATGCTTG CTTTGGTTGA TGGCGTTCCT
AGAACTTTGA GTTTGGATGC GTTTATTCGT CATTGGGTAA CTCATCAGCT TGAAGTAATT
GATAGGCGTA CACGTTACTT AAAGCGTGAA GCTGAAGAGC GAGATCATAT TTTGCAAGGC
TATTTGAAAG CTTTGGATAT GATTGATGAA GTTGTGGCTT TAATTCGTTC ATCTAAAGAT
GTTGAAACTG CTCGTACTGG TTTAATGAAT TTGCTTGATG TTGATGAAGT TCAAGCGGAT
GCCATTCTTG CAATGCAACT TCGTAGACTT GCAGCTTTGG AACGTCAGAA GATTCTCGAC
GAGCATGAAG ATTTGATGAT TAAAATTGCT GATTACAACG ATATTTTGGC AAGCCCAGAA
CGTCAGCGCA AAATTGTTGG CGATGAACTT GATGAAATTG TTGCAAAATA TGGTGATGAT
CGCAGAACTA AGATTCTTCC ATTCTCTGGT GAAATGAATG TTGAAGATCT TATTGCTGAA
GAAAACGTTG TTGTAACAGT AACTCGCGCA GGTTATATTA AGCGTACTAA GGCAGACGAG
TATCGTGCTC AACACCGCGG TGGTAAAGGC ATTAAGGGTG CAAAGCTTCG TGAAGATGAT
GTAGTTGATC ACTTCTTCTT AACTTCTACA CACAATTGGT TGCTCTTCTT TACTAATCGT
GGTCGAGTTT ATCGTCTGAA AGCCTACGAA CTTCCAGAAG GATCTCGCGA TTCTAAAGGT
CAGCATGTTG CTAATTTGTT GCAATTTACT CCTGGAGAAA CAATTCAAGC AGTGTTATCA
ATTCCAAATT ATGATGTTGC TAAATACTTG GTATTGGCAA CTCGTTCCGG GAAAGTTAAG
AAAACTGCAT TGCAAGAGTA TGATTCTCCA CGTCAAGGCG GTTTGATTGC TGTACGTTTG
ATGGCAAATG AAGAAACAGG TGAACCTGTC GACGAGCTTA TTGGTGCAGC TTTGTGCAAT
TCAGAAGATG ACATTATTCT TGTTTCTAAG CTTGGAATGA GTTTGAAGTT TAGAGCAGAT
GATGAACAAC TTCGACCAAT GGGTCGTCAG ACTGCCGGCG TTCAGGGTAT GAGATTCCGT
GAAGGTGACG AATTACTCGA TATGGACGTT GTTGCGGCAG AAACTAGTAA AGATCTTCTT
GTTGTTACTA ATGAAGGTTT TGCTAAGCGA ACTGCTATTG AAGAGTATCG TTTGCAAGGA
AGAAACGGCT ACGGTGTTAA AGCTGTTCAA CTTGCAGAGG GTCGTGGTTC ATTAGTTGGA
GCTTTGATTG TTGAAGAAAC AGATCAAGTA ATGGCAATTA TGAAGTCCGG TAAGGTAATT
CGTTCTGACA TTAATGAAGT GAAGCGCACT GGTAGAACAA CTCAAGGCGT AACCTTAGCT
AAGCCGGATA AAGGCGATGA AATTATTTCT ATTGCCCGTA ATGAAGAAAC GGATGACGAA
GAAAATCAAT TAGAAGAAAA AGAAGCTACT TCAGAAAATG AGGAAGCTTA A
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| Protein sequence | MVDEINSARD DAERDQLPDG SMEPQSPQEA DNTDYGLMKG ARVKNMDLQQ EMRESYLAYA
LSVIVERALP DVRDGLKPVH RRVIYAMYDG GYRPDRGYNK CSRVVGDVMG KYHPHGDSAI
YDTLVRMAQS WSMRYMLVDG QGNFGSPGDD PAAAMRYTEC RMAPLAMEMV RDIDKDTVDF
LPNYDGKTQE PTVLPARFPN LLVNGSAGIA VGMATNIPPH NMREVADGVH WALDHPDASK
EELLEALIQR IKGPDFPTGA TILGHKGIEQ AYRTGRGLIT MRAVVNTEEI KGRMCLVVTE
LPYQVNPDRL AASIREAVRD GKIQGIADMR DETSGRTGQR LVLVLKRDAV PKVVLNNLYK
HSQLQQTFGA NMLALVDGVP RTLSLDAFIR HWVTHQLEVI DRRTRYLKRE AEERDHILQG
YLKALDMIDE VVALIRSSKD VETARTGLMN LLDVDEVQAD AILAMQLRRL AALERQKILD
EHEDLMIKIA DYNDILASPE RQRKIVGDEL DEIVAKYGDD RRTKILPFSG EMNVEDLIAE
ENVVVTVTRA GYIKRTKADE YRAQHRGGKG IKGAKLREDD VVDHFFLTST HNWLLFFTNR
GRVYRLKAYE LPEGSRDSKG QHVANLLQFT PGETIQAVLS IPNYDVAKYL VLATRSGKVK
KTALQEYDSP RQGGLIAVRL MANEETGEPV DELIGAALCN SEDDIILVSK LGMSLKFRAD
DEQLRPMGRQ TAGVQGMRFR EGDELLDMDV VAAETSKDLL VVTNEGFAKR TAIEEYRLQG
RNGYGVKAVQ LAEGRGSLVG ALIVEETDQV MAIMKSGKVI RSDINEVKRT GRTTQGVTLA
KPDKGDEIIS IARNEETDDE ENQLEEKEAT SENEEA
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