| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0004 |
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| Symbol | |
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| ID | 8708750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 3676 |
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| End bp | 4854 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482127 |
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| Product | triacylglycerol lipase |
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| Protein accession | YP_003373278 |
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| Protein GI | 283782524 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000112328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAACGCA ATGCAGTAAC AGGGTTTTTA ACTAGCCTAT GCATGCTCTT GAGCCTATCT
GCTTTCGCAA TGCCAGCAAT GGCAACAACC GCAGATAATT ATGCAAAAAC TCCACTTACT
GCTGAAACAG CTAAACAAAT CGCAAATGGA ACTATAGGCT TAGATTTACC TGGGGCTTTG
GATATGTCTT TATATCACAA GAAGCCTCTT GATCCACAAG CTGATTTAGA TGGTGACGGC
TTAACTAATA GTCAGGAAAT TTACACTTAC ACTAAAGACG GTAAGACTTA TTATGGGTAC
AATTCTCACC CTATGATGAA CGATACCGAT GGCGATGGTA TTCCAGATAA TCAAGACAGC
AATCCTCGCA GGTGGGATAT TAGTCCTCGC GATATGGCTT TATTCTCTGA ACTTTCTTAT
CGAGATGATA ATTACATAAA TAAGGTACTC GATTACACTA AACCGCTTCA CGACATTTAC
AAAAATCGCA GTGAGTACCG CCTTATGCAC AACGAGCTTG CACCATTCTG GAAAGTTAAG
GAAACCTACC ACAAAAGGGG AGGATTTGAT GCTGTTTTGT TTGAAAATGT AAGTCCATAC
CCATTCTTAG AACAAGGCAC TGTTCAAGTA CTAGCAATTC GTGGAACTTC CCAATTTAAT
GATTACGATG ATGATTTTGC AATAGCTGTA GGTCATAACC CAGATCAAGC TAAAGATGTT
GAGCAGTTGA TTGAGCGTTA TGGTCGCGAA AATACTGTTA GCAATTTGTA TATTACCGGA
CATTCCCTCG GAGGATATCT TGCACAGCGT GCTTTAATTC GTGCTAAAGG CAAAGGCTAC
AACTGGATTA AGAAAATTTA CACATTCAAT TCACCACAAA TTTGGGGAAA TATTTTCAAC
CGTTGGTTGC GTGCCGTCGC CAATACTGGC GATAAGCTCA CTCGAGAAGG TTACGCTGTT
CATTACAAAG TAGACAACGA CAAGGTTATT CGTTCTGTTG GCAATTTTGC TGGAGCTATA
AGCGTCAGCA ATTCTGCGCA AGGACATAGC TCTCGAAGCT ATCTTGAGGC CCGTATGAAC
AATTTCCCAG GTTTCACCGT AGGTACTAGA GGAGATATTT CTGGCACTGG ACGTTGGATG
GAAGAACTTA ACAACTTCTA CGATGTTCGC ACGTTCTAA
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| Protein sequence | MKRNAVTGFL TSLCMLLSLS AFAMPAMATT ADNYAKTPLT AETAKQIANG TIGLDLPGAL
DMSLYHKKPL DPQADLDGDG LTNSQEIYTY TKDGKTYYGY NSHPMMNDTD GDGIPDNQDS
NPRRWDISPR DMALFSELSY RDDNYINKVL DYTKPLHDIY KNRSEYRLMH NELAPFWKVK
ETYHKRGGFD AVLFENVSPY PFLEQGTVQV LAIRGTSQFN DYDDDFAIAV GHNPDQAKDV
EQLIERYGRE NTVSNLYITG HSLGGYLAQR ALIRAKGKGY NWIKKIYTFN SPQIWGNIFN
RWLRAVANTG DKLTREGYAV HYKVDNDKVI RSVGNFAGAI SVSNSAQGHS SRSYLEARMN
NFPGFTVGTR GDISGTGRWM EELNNFYDVR TF
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