Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_9360 |
Symbol | |
ID | 8672711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 10306239 |
End bp | 10306997 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | apurinic endonuclease Apn1 |
Protein accession | YP_003344721 |
Protein GI | 271970525 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.480693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.839717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGTA TCGGAGCCCA TGTCGACCAG GACGACCCGC TGACCCACGC CAGGGCGCGC GACGCCGAGG TCGCGCAGTT CTTCCTCGGC GACCCGCAGG GCTGGAAGGG CCCGGTCATC GGCGAGAAGA CCCCGGAGAT CAGGGACTCC GGCGTGGACG TCTACATCCA CGCGCCCTAC GTGATCAACG TGGCCACCGC CAACAACCGG ATCCGCATCC CCAGCCGCAA GCTGCTGAGC TCCAACCTCG CCGCGGCGGC CGAGCTGGGC GCCAAGGGCC TGATCGTCCA CGGCGGCCAC GTCGGCGCCG GCGACGACCC GCAGAAGGGC TTCGACAACT GGCGCAAGGT GTTCGAGCGC CTGGAGGAGC ACGAGGTCCC GGTGCTCATC GAGAACACCG CGGGAGGCGG CAACGCGATG GCCCGCAAGC TGGAGCGCAT CGCCCGGCTG TGGGACGCCC TCGACGGCTT CGACGTGGGT TTCTGTCTGG ACACCTGCCA CGCGCACGCG GCCGGTGAGG AACTGGCCGA CGTGGTCGAG CGGATCATGG CCATCACCGG CCGGATCGAC CTGGTCCACT GCAACGACTC GCGCGACGCC GCGGGGTCCG GTGCCGACCG GCACGCCAAC CTCGGCGCGG GCCGGATCGA CACCGAGCTG ATCCTCTCGG TCTGCCGGAG CGCCGGGGCG CCGATCGTGG TGGAGACGCC GTTCGAGGGC CAGGCCGAGG ACATCTCTCT CCTCAGAAAG AGCCTCTGA
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Protein sequence | MPRIGAHVDQ DDPLTHARAR DAEVAQFFLG DPQGWKGPVI GEKTPEIRDS GVDVYIHAPY VINVATANNR IRIPSRKLLS SNLAAAAELG AKGLIVHGGH VGAGDDPQKG FDNWRKVFER LEEHEVPVLI ENTAGGGNAM ARKLERIARL WDALDGFDVG FCLDTCHAHA AGEELADVVE RIMAITGRID LVHCNDSRDA AGSGADRHAN LGAGRIDTEL ILSVCRSAGA PIVVETPFEG QAEDISLLRK SL
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