| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_9340 |
|---|
| Symbol | |
|---|
| ID | 8672691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 10289829 |
|---|
| End bp | 10290566 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | putative ICC protein |
|---|
| Protein accession | YP_003344701 |
|---|
| Protein GI | 271970505 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.365047 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACAC TGGCGCATGT GAGTGACATT CATATCGGCG GCTCCCCCCG CAGCGTCGAG
CGGGCGCGGG CCGTCATGCG ACACCTGGAG GAGCTGCCGG GCCCGCTGGA CGCCGTCATC
GTGACCGGCG ACATCGCCGA CCACGGCACG GCCGAGGAGT ACGGAACCGC ACGCGAGCTG
CTGACCTCGC GTTACCCGAC GGTGCTCTGC CCGGGCAACC ACGACGTCCG CCCGGCCTTC
CGCGAGGTCC TTCTCGGCCA GGACGGCGAC GGCCCGGTCA ACCAGGTCCT GCGGCTCGAC
GGCCTGACCG TGGCCCTGTG CGACTCCAGC ATCCCCGGAC GGCCGGAGGG TGTCCTGGAG
GACGAGACGA TCGCCTGGCT GGAGGCCGTG CTCGCCGAGT CCCCCGCCAC CCCGGTCATC
GTGGGCATGC ACCACCCGGC GGTGGCGCTG GGCATCCCCT ACGTGGACAC CATCGGGCTC
CGGGAGCCGG AGCGGCTGGA GGGGGTCCTG CGGCGGCACC CCCAGGTGGT CGCCGTGCTG
GCCGGTCACG CCCACACCCC GGCGAGCACC ACCTTCGCCG GCCTGCCCCT GATCGTCGCC
CCGGGGGTCG TCTCCACCGC GCTGCTCCCC CAGGAGTACG CCTCGCCGGA CCCCCGCGAC
TTCGACCTCC CGCCCCAGAT CGCCATGCAC GTCTTCGACG ACGGCCGCCT CACCACCCAC
ATGCGCCTGG TCCGCTGA
|
|---|
| Protein sequence | MLTLAHVSDI HIGGSPRSVE RARAVMRHLE ELPGPLDAVI VTGDIADHGT AEEYGTAREL
LTSRYPTVLC PGNHDVRPAF REVLLGQDGD GPVNQVLRLD GLTVALCDSS IPGRPEGVLE
DETIAWLEAV LAESPATPVI VGMHHPAVAL GIPYVDTIGL REPERLEGVL RRHPQVVAVL
AGHAHTPAST TFAGLPLIVA PGVVSTALLP QEYASPDPRD FDLPPQIAMH VFDDGRLTTH
MRLVR
|
|---|
| |