Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_9221 |
Symbol | |
ID | 8672568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 10167292 |
End bp | 10169358 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | dTMP kinase |
Protein accession | YP_003344582 |
Protein GI | 271970386 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.625222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCC CTGGCCGGAA CACCGCGCGC CGCAAGCCCC CCAACGTGCT GGCCAACGCT CCGTTCCGCA AGCTCTGGAC GGCCATGTCG CTGTGCAGCC TCGGAGACTG GCTGAACATC ATCGCGTTGA CCGCGCTTGC CGGAAACCTC ACCAGCGGAG CCGGATACAA GGCCCAGAGC CTGGCCATCG GCGGCGTCTT CGTCGCGAAG ATGCTCCCGG CCATCCTGCT GGGCCCCCTC GCGGGCGCGT TCGCCGACCG GTTCGACCGC CGGCTGACCA TGTTCTTCTC CGACCTGCTG CGCTTCGCGC TGGTCCTGTC GATCCCGCTG ATCGGCAGCT ACCAGTGGGT GATCATCGCC ACATTCCTGG TCGAGTGCGT CAACCTCTTC TGGGTCCCCG CCAAGGACGC CACGGTGCCG AACCTGGTGC CCAAGGAGCG GCTGGAGGAG GCCAACCAGC TCAACCTCCT GGTCACGTAC GGCACCGCCC CGGTCGCCGC GCTCCTGTTC GCCGTGCTGT CGGTGGCCGA CGACGCCCTG GGCAGGTTCG TCCCGTACTT CGCCGACCGT GACACCTACC TGGCGCTGTT CATCAACGCC ATCGCGTACC TGGTGTCGGC CTTCATCATC TTCACGCTCA AGGACATCTC GAAGACCGGC GCGACGGCCA CCGCGATCTC CACGCCGTCG GTGCTGCGGC AGATCATCGA CGGCTGGCGC TTCGTCGGCG GCAACCGGCT GATCCGGGGC CTGGTCATCG GCATGCTCGG CGCGTTCGCC GCCGGCGGCA CGGTGGTCGG TGTGGCCAAG ATCTACGTGG TGGCGTTGCA GGGTGGCGAC GCGGCCTACG GCGTGGTGTT CGGCGCGGTC TTCGTCGGCA TGGCCTCCGG CATGTTCTTC GGGCCCAGGC TGCTGCGGGA GCTGTCCCGG CGGCGGCTGT TCGGGCTGTC GATCGTCGTG GCCGGGGTGG TGCTCGCCGC GATCGCGCTC ATCCACAACC TGGTGATCGT CGTCATGCTC ACCGTGGTGC TGGGGGCGTG CGCCGGGATC GCCTGGATCA TCGGCTACAC CATGATCGGG CTGGAGGTGG AGGACAACCT GCGGGGCCGT ACGTTCTCCT TCCTGCAGTC GCTCGCCCGG GTCACCCTGC TGCTGGTGGT CGCGGTCGCG CCGACGCTGG CGGGCCTGTT CGGCAGGCAC GAGGTCAGGC TCGGCGGGGA GACGGTCTAC CGGTTCGACG GCTCCAACCT GGTGCTGCTG ATCGGCGCGC TGCTCGCGGT GATCGTCGGT CTCCTCGCGC TGCGGCACAT GGACGACCGC AAGGGCGTGC CGATCGTCTC CGACCTGGTC GCGGCGGCGC GCGGCGAGCG GTTCGCGCCC GAGGAGACCG AGCAGCCACG CGGGATGTTC ATCGCGTTCG AGGGCGGCGA GGGCTCGGGC AAGACCACGC AGTCCAGGTT GCTCGCGATC TGGCTCCGGG ACCAGGGCTT CGACGTCGTG CAGACCCGGG AGCCGGGCTC GACCAAGGTG GGCATGCGGC TGCGCGCCAT CCTGCTGGAC GCCGTCCACC AGGGGCTGTC GGCGCGGTCG GAGGCGCTGC TGTACGCGGC CGACCGGGCC GAGCACGTGG AGAAGGTCAT CCGTCCGGCG CTCTACCGGG GGTCGATGGT GATCTCCGAC CGCTACGTGG ACTCCTCGCT GGCCTACCAA GGGGCCGGGC GGGCCCTGGA GCCCGGCGAC GTGGCCAGGA TCAACGCCTG GGCCACCGGC GGGCTCGTCC CCGACCTGAC CGTGCTCATC GACACCCCGC CGTCCGTCGG CCTGACCCGG CTGGGCGGGG CCGCCGACCG GATCGAGTCC GAGCCGCTGG AGTTCCACGA GCGGGTGCGC CGCGAGTTCC GCTCGCTGGC CGCCGCCGCC CCGGAACGCT ACCTGGTCGT CGACGGGACC CTCGCCCAGG AGCAGATCTC CCTGCTCATC CATGACCGGG TCCGCGAGGT GCTGCCCGAC CCGGTGCCGG AGGAGTCGGA GGACGCCACC GGGACCATCC CCGTCATCCG CGACTGA
|
Protein sequence | MTTPGRNTAR RKPPNVLANA PFRKLWTAMS LCSLGDWLNI IALTALAGNL TSGAGYKAQS LAIGGVFVAK MLPAILLGPL AGAFADRFDR RLTMFFSDLL RFALVLSIPL IGSYQWVIIA TFLVECVNLF WVPAKDATVP NLVPKERLEE ANQLNLLVTY GTAPVAALLF AVLSVADDAL GRFVPYFADR DTYLALFINA IAYLVSAFII FTLKDISKTG ATATAISTPS VLRQIIDGWR FVGGNRLIRG LVIGMLGAFA AGGTVVGVAK IYVVALQGGD AAYGVVFGAV FVGMASGMFF GPRLLRELSR RRLFGLSIVV AGVVLAAIAL IHNLVIVVML TVVLGACAGI AWIIGYTMIG LEVEDNLRGR TFSFLQSLAR VTLLLVVAVA PTLAGLFGRH EVRLGGETVY RFDGSNLVLL IGALLAVIVG LLALRHMDDR KGVPIVSDLV AAARGERFAP EETEQPRGMF IAFEGGEGSG KTTQSRLLAI WLRDQGFDVV QTREPGSTKV GMRLRAILLD AVHQGLSARS EALLYAADRA EHVEKVIRPA LYRGSMVISD RYVDSSLAYQ GAGRALEPGD VARINAWATG GLVPDLTVLI DTPPSVGLTR LGGAADRIES EPLEFHERVR REFRSLAAAA PERYLVVDGT LAQEQISLLI HDRVREVLPD PVPEESEDAT GTIPVIRD
|
| |