| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_9152 |
|---|
| Symbol | |
|---|
| ID | 8672498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 10097240 |
|---|
| End bp | 10098205 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Cell wall-associated hydrolase (invasion- associated protein)-like protein |
|---|
| Protein accession | YP_003344516 |
|---|
| Protein GI | 271970320 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTCA TCGGACTGGC CTTCGCCTCC CTGACCCTCG GCACCCCTGT CGTCGCGGCC
ACCGCCGACC CGAAGCCCAG CCTTCCGGAG CTGGCCAAGC AGGTCGAGAA GCTGCACACC
GACATCGAAA CGCTCACCGA GCAGTACAAC GGCGAGCGCG TCAAGCTCAA GCAGGCGCAG
CGCGCCGCCG CGAGCGCCAA GAAGACCCTC GCCGTCAGCG AGTCCGAGCT GGCGTCCCGG
CGCGCCAAGG CCACCCTCCT CGCGCAGAGC TCCTACATGT CGGGAGGTCT GGGCGCCGCC
ATGGTCTTCA GCCAGCCGAC CGATCCCGAC ACCTTCCTCG ACCAGGCCAC CACGAACTAC
GCCCTCCAGC AGCAGCAGAG CGAGGAGGTC GCCCAGGTCG CCCGGGCGAT CGAGGCCGCC
GAGCGGGCGC AGGCCAGCGC CAAGGCCCGG ACCACCGAGG TCAAGGACCT CCTGTCGGAG
ATCGGCACCA AGCGCACCAA GATCGAAGGG CTCGTCGACA AGGTCGAGAG CGACCTGTTC
AGCGAGGTGC GCAGCCGGGC CAAGTCCAAC AGCCGGGGCA GCCGGGTGAA GATCAGCGTG
CCGATCGTCG GCAGCGGCAA GGCCGCCGAG GCCGCCCGCT GGGCACTCTC CCAGCAGCTC
AAGCCGTATG TCTGGGGCGC CGAGGGCCCC AACTCCTTCG ACTGCTCCGG CCTGGTCATG
TGGGCCTACC AGAAGGTCGG CATCAGCCTG CCGCACTACA CCGGTGACCA GTGGACCGCG
GGCACCCACA TCTCCAGGGA CGAGCTGCGC CCCGGTGACC TCGTCTTCTT CTACAACGAC
CTGCACCACG TCGGCATCTA CATCGGCGCC GGCCTGATGG TCCACGCGCC CCGGACCGGC
GACGTCATCC ACATCGCCTC GATCGACAAC CGGCCCTTCG CCGGTGGCGT GCGGGTCGCG
GACTGA
|
|---|
| Protein sequence | MALIGLAFAS LTLGTPVVAA TADPKPSLPE LAKQVEKLHT DIETLTEQYN GERVKLKQAQ
RAAASAKKTL AVSESELASR RAKATLLAQS SYMSGGLGAA MVFSQPTDPD TFLDQATTNY
ALQQQQSEEV AQVARAIEAA ERAQASAKAR TTEVKDLLSE IGTKRTKIEG LVDKVESDLF
SEVRSRAKSN SRGSRVKISV PIVGSGKAAE AARWALSQQL KPYVWGAEGP NSFDCSGLVM
WAYQKVGISL PHYTGDQWTA GTHISRDELR PGDLVFFYND LHHVGIYIGA GLMVHAPRTG
DVIHIASIDN RPFAGGVRVA D
|
|---|
| |