Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8998 |
Symbol | |
ID | 8672340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 9947407 |
End bp | 9948096 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003344372 |
Protein GI | 271970176 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.115445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTTCGA CATCCGGAGC CGCCAAGCAG GACAAACCTG CGGCGGAGGG CGCGCGACCG GCGCGGCGCA GGCTCAGCGT GGACCGGCGT CGTGAGGAGC TCATGGCGGC GGCTCTGGAG CTGTTCAGCA CGCGCGACGC CGAGGACGTC TCCATCGACG ACGTGGCCTC GGCGGCGGGC GCGTCGCGGG CCCTGGTCTA CCACTACTTC GGCGGCAAGC AGGAGCTCTA CGTCGCCGCG CTGAAGAGCG CCGCGGCCCA GCTGGAGGCG CGGCTGCGGC CCCCCGAGGG CGGCCGCCCG CTCGACGATC TCGCCGGAGG GCTGGCGCGC TACTTCGACT TCGTCGAGGA GCACGCGGCC GGTTTCGCGG CGCTGCTCAA GGGCGGCCCC GCCAACCGCA GCGGCGAGAT CGGTGAGATC GTCGACAGCG TCCGGCACCG CCTGTTCCGC CTCATCATGA AACAGATGCG GGTCGACGAG CCGGGGCCCG CGCTCCGCAT CACGCTGCGT TCGTGGATCG CCTCCGTCGA GACGGCCGGT CTCGACTGGC TGGAGCACCG GGACATCGAG CGCCCGGCGC TTGAACGCAT GCTGGTCGAT CAGATGGTGG CGCTGCTCGG AGTGGCCGCG GCTCACGATC CGCAGGTCGA GCAGCTCCTT GAGGGCCTGG TCCGCGAACA CGCGCCGTAG
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Protein sequence | MGSTSGAAKQ DKPAAEGARP ARRRLSVDRR REELMAAALE LFSTRDAEDV SIDDVASAAG ASRALVYHYF GGKQELYVAA LKSAAAQLEA RLRPPEGGRP LDDLAGGLAR YFDFVEEHAA GFAALLKGGP ANRSGEIGEI VDSVRHRLFR LIMKQMRVDE PGPALRITLR SWIASVETAG LDWLEHRDIE RPALERMLVD QMVALLGVAA AHDPQVEQLL EGLVREHAP
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