Gene Sros_8998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8998 
Symbol 
ID8672340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9947407 
End bp9948096 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content72% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003344372 
Protein GI271970176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.115445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTTCGA CATCCGGAGC CGCCAAGCAG GACAAACCTG CGGCGGAGGG CGCGCGACCG 
GCGCGGCGCA GGCTCAGCGT GGACCGGCGT CGTGAGGAGC TCATGGCGGC GGCTCTGGAG
CTGTTCAGCA CGCGCGACGC CGAGGACGTC TCCATCGACG ACGTGGCCTC GGCGGCGGGC
GCGTCGCGGG CCCTGGTCTA CCACTACTTC GGCGGCAAGC AGGAGCTCTA CGTCGCCGCG
CTGAAGAGCG CCGCGGCCCA GCTGGAGGCG CGGCTGCGGC CCCCCGAGGG CGGCCGCCCG
CTCGACGATC TCGCCGGAGG GCTGGCGCGC TACTTCGACT TCGTCGAGGA GCACGCGGCC
GGTTTCGCGG CGCTGCTCAA GGGCGGCCCC GCCAACCGCA GCGGCGAGAT CGGTGAGATC
GTCGACAGCG TCCGGCACCG CCTGTTCCGC CTCATCATGA AACAGATGCG GGTCGACGAG
CCGGGGCCCG CGCTCCGCAT CACGCTGCGT TCGTGGATCG CCTCCGTCGA GACGGCCGGT
CTCGACTGGC TGGAGCACCG GGACATCGAG CGCCCGGCGC TTGAACGCAT GCTGGTCGAT
CAGATGGTGG CGCTGCTCGG AGTGGCCGCG GCTCACGATC CGCAGGTCGA GCAGCTCCTT
GAGGGCCTGG TCCGCGAACA CGCGCCGTAG
 
Protein sequence
MGSTSGAAKQ DKPAAEGARP ARRRLSVDRR REELMAAALE LFSTRDAEDV SIDDVASAAG 
ASRALVYHYF GGKQELYVAA LKSAAAQLEA RLRPPEGGRP LDDLAGGLAR YFDFVEEHAA
GFAALLKGGP ANRSGEIGEI VDSVRHRLFR LIMKQMRVDE PGPALRITLR SWIASVETAG
LDWLEHRDIE RPALERMLVD QMVALLGVAA AHDPQVEQLL EGLVREHAP