Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8987 |
Symbol | |
ID | 8672329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 9935172 |
End bp | 9936608 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_003344361 |
Protein GI | 271970165 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGCTA CCCGCAAGTG GTGGGCGCTG GGAGCGATCT CGCTGGCCAC TTTCATGACG TACCTGGACA ACAACGTGGT CAACGTCGCG TTGCCGACGA TCCAGCGGGA CCTCGGGGTA AGCATCTCGG GGCTGGAGTG GATCGTGAGC GGCTACATCC TGGTCTTCGC CGGGCTGATG CTGGTCGGCG GGCGCCTGGC GGACGTCTTC GGCCGGCGGC GGATCTTCAT GATCGGTCTC GGCGTGTTCA CCGTGGCGTC GTTGGCCGCC GGTCTGGCCA CGGACGGCAC GGGTCTGATC GCCGCCCGGG CGCTGCAGGG CGTCGGCGCC GCGTTCCTCA CGCCCACCGC GCTCGCGCTG CTCACCTCGA TCTTCCCCGA CCCCCGGGAA CGCGCCACGG CGGTCGGCAT GTGGAGCGCG GTCGGCGCGC TGGCCCTGGC CCTCGGCCCG CTGACCGGCG GGTTCATCAG CGAGCGGTGG GACTGGGGGT GGATCTACCT GATCAACGTA CCGATCGGGA TCGCGACCTT CGGACTCGGC CTGTGGGCGA TCAGAGTGGC CCCGCAGGAT CGGGTACGGC ACAGCCTGGA CGTCCCCGGA CTGGTGACGT CCGGCCTGGC GCTGTCCGCG CTGACGTACG GGCTGATCGA GGGCGACGGG GCCGGCTGGA CCTCGCCGGA GATCCTGGGC GCCTTCGGGC TCGCGGTGGC GGCGGCGGTG ACGTTCGTGG TGATCGAGAC CAGGAGCCGG GAGCCGATGA TCGACCTGTC GCTGTTCCGG TCGCGGGTCT TCAGCGGGGG CGTGCTCTCG ATGGGGCTGT GGTCGTTCGG GGTGTTCGGG ATCTACTTCT TCACGGCGCT CTACCTGCAG AACGCGCTGG GCTTCTCACC GATGGAGGCC GGGGTCTCGT TCGTGCCCAT GGCCCTGGTG ATGGCGGTGA CCGCGGCCGT CGCCTCGCGG ATCAGCGGCG CGCTCGGGAC CGCGCGGACC GTGGCCGCCG GGCTCCTGCT GATGGCCGCG GCGGTGTTCG GGCTCTCCTT CATCGGCGAG GGCGCCTCGT TCGGGGAACT GCTGCCGTGG TTCCTGGTCT ACGGGCTGGG CGGCGGGCTG CTGGTACCGC TCACCACGGC CATCCTGGGC ACGCTCCCCG CCGGCCGCGC CGGGGTGGCC TCGGGCGTGC TGAACGTCTC CCGGGAGATC TTCGGCCTGC TCGGGATCAC CGTCCTCGGC GCGATCCTCA CCGGCCGGCA GACCTCGATC CTCCGGGACG GCGCCACGCC GCTGACGGCC TTCCTGGAGG CCTACCAGTC CACGCTGGTC ATCGCGGCGG CCATCGTGCT GGTGGGCGTG CCGGTCAGCC TGTTCGCCCT GCGGATCCCC CGGACCCCGG AGCACGTGGA GGCCCCCGCC GAGCGCCCCG CCGTACCGGT GGCGTGA
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Protein sequence | MTATRKWWAL GAISLATFMT YLDNNVVNVA LPTIQRDLGV SISGLEWIVS GYILVFAGLM LVGGRLADVF GRRRIFMIGL GVFTVASLAA GLATDGTGLI AARALQGVGA AFLTPTALAL LTSIFPDPRE RATAVGMWSA VGALALALGP LTGGFISERW DWGWIYLINV PIGIATFGLG LWAIRVAPQD RVRHSLDVPG LVTSGLALSA LTYGLIEGDG AGWTSPEILG AFGLAVAAAV TFVVIETRSR EPMIDLSLFR SRVFSGGVLS MGLWSFGVFG IYFFTALYLQ NALGFSPMEA GVSFVPMALV MAVTAAVASR ISGALGTART VAAGLLLMAA AVFGLSFIGE GASFGELLPW FLVYGLGGGL LVPLTTAILG TLPAGRAGVA SGVLNVSREI FGLLGITVLG AILTGRQTSI LRDGATPLTA FLEAYQSTLV IAAAIVLVGV PVSLFALRIP RTPEHVEAPA ERPAVPVA
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