| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8924 |
|---|
| Symbol | |
|---|
| ID | 8672262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 9859930 |
|---|
| End bp | 9860703 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | trehalose-6-phosphatase |
|---|
| Protein accession | YP_003344299 |
|---|
| Protein GI | 271970103 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.568468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGA ACACCCCCGA CGGGCTGCGG GCGATCCTGG ACGACCCCGC CGGGGCCGTG
ATCGGGCTCG ACTTCGACGG CACGCTCTCC CCGATCGTGC CCGACCCCGA CTCGGCCAGG
ATCCACCCGG ACGGCCCCGC GGTGCTGGCC AGGCTCGGCG AGCTGGTCGG CGCCGTGGCG
ATCGTCACCG GCCGCCCGGC CGCCACCGCC GTCGAGTACG GCTCCCTGGC CCGGGTGCCG
GGGCTGGTCG TGCTCGGCCA CTACGGCCTC GAACGCTGGG AGGCGGGCAG GCTCACCGCG
CCCCCCGTCC ACCCCGGCCT GGCCCGGGTC CGCGCCGAGC TGCCCCCGCT GATCTCCAGG
TTCGACGGGA CCCGGTTCGA GGACAAGGAA CGGTCGGTGG CCGTGCACAC GCGGCAGACC
GCCGACCCGC AGGCCGTGCT GGAGGCGCTG CGCGAGCCCG TCGCCAAGCT GGCGGCCGAG
GCCGGGCTGA CGGTCGAGCC GGGCAAGTTC GTGCTGGAGC TGCGGCCGCC GGGGGTGGAC
AAGGGAGTGG CGCTGAGCGC CTTCCTGGAG GAGCGGTCGG CGCGGTCGGT GCTCTTCGCC
GGGGACGACC TGGGGGATCT GCCGGCCTTC GCGGCCGTGC GGGCGTCCGG GCTACCTGGC
GTGACGGTGT TCAGCGGGTC GGCCGAGATC GCCGTGGAGG CCGACATCGT CGTGGACGGG
CCCTCCGGGG TGATGAAGCT GCTCGGCTCC ATCGCCGATG CCATTGGGCG TTAA
|
|---|
| Protein sequence | MTVNTPDGLR AILDDPAGAV IGLDFDGTLS PIVPDPDSAR IHPDGPAVLA RLGELVGAVA
IVTGRPAATA VEYGSLARVP GLVVLGHYGL ERWEAGRLTA PPVHPGLARV RAELPPLISR
FDGTRFEDKE RSVAVHTRQT ADPQAVLEAL REPVAKLAAE AGLTVEPGKF VLELRPPGVD
KGVALSAFLE ERSARSVLFA GDDLGDLPAF AAVRASGLPG VTVFSGSAEI AVEADIVVDG
PSGVMKLLGS IADAIGR
|
|---|
| |