Gene Sros_8880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8880 
Symbol 
ID8672218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9804696 
End bp9805886 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003344256 
Protein GI271970060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0769827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATCG GGATCGTCGG TGCGGGAATC GTCGGCCTGG CGGTGGCCAG GGAGGTGGCG 
CGGACCCGCG GCGCCACGGT GACCGTCCTC GACAAGGAGG ACCGCGTCGG AGCCCACCAG
ACCGGGCACA ACAGCGGGGT CGTCCACGCG GGGATCTACT ACCAGCCGGG TTCGCTCAAG
GCCCGGCTCT GCCGCGAGGG CGTGGCCCTG CTCCGGCAGT ACTGCGCGGA GCACCGCATC
CCCTACGACG AGGTGGGCAA GCTCGTCGTC GCCTCCACCG CGGCCGAGCG GCCGGGGCTG
CGGAAGATCG CCGAGCGCGC CCGCGCCAAC CAGGTCCCCG GCATCGCCGA GCTGGACGCG
CTGGCGCTGC GCGAGGTCGA GCCGCACACC GTCGGGGTGG CCGCCGTCCA CTCCCCGCAC
ACCGCGATCG CCGACTTCCC CGCCGTCGCC CGCCGTCTGG CCCTGGACGT GGAGGAGACG
GGCGGTTCGG TGCTGCTCTC CCACCCGGTC CGCGCGCTGC GGGAGACCGC GAGCGGGGTG
GAGGTGCTGG CCGGGACGCG CAGGCTGCGC TTCGACCGGC TGATCGTCTG CGCCGGGCTG
GGCACCGACA CCGTCGCCCG GATGGCCGGG GCCGCAGGCG ACGTGCGGAT CGTCCCCTTC
CGCGGGGAGT ACTACGCGCT GGCCGGCGCG TCGAAGGAGC TGGTCCGCGG GCTGATCTAC
CCGGTGCCCG ACCCCCGCTA CCCGTTCCTC GGCGTGCACC TGACCCGCAG GATCGACGGC
GAGGTTCTGG TCGGCCCCAA CGCGGTCATG GCGCTGGCCC TGGAGGGCTA CTCCTGGGGT
GACGTCGATC TCAGCGACCT GCGCCGGATC CTGGCCTGGG AGGGCACCCG GCGGCTGGCG
GCCAGGCACT GGCGGACCGG GGTGCGGGAG GTGCTCGGCT CCATGGCGAA GGGGTCCTTC
CTGGCGGCCG CGCGCCGCTA CGTGCCCGAG CTCACCAGGG CCGATCTGGT CAGGACCGCC
GGGGGAGTCC GGGCCCAGGC CGTGGCCAGG GACGGGAGCA TGCTCGACGA CTTCGCGATC
GACGTGCACG GCCGCGTCAC GCTTGTGCGG AACGCCCCCT CGCCGGCGGC GACGTCGAGT
TTGGCAATCG CCAGGCATAT CGTGGGGTTA ACCTCTGTGT TGACCCGTTA A
 
Protein sequence
MNIGIVGAGI VGLAVAREVA RTRGATVTVL DKEDRVGAHQ TGHNSGVVHA GIYYQPGSLK 
ARLCREGVAL LRQYCAEHRI PYDEVGKLVV ASTAAERPGL RKIAERARAN QVPGIAELDA
LALREVEPHT VGVAAVHSPH TAIADFPAVA RRLALDVEET GGSVLLSHPV RALRETASGV
EVLAGTRRLR FDRLIVCAGL GTDTVARMAG AAGDVRIVPF RGEYYALAGA SKELVRGLIY
PVPDPRYPFL GVHLTRRIDG EVLVGPNAVM ALALEGYSWG DVDLSDLRRI LAWEGTRRLA
ARHWRTGVRE VLGSMAKGSF LAAARRYVPE LTRADLVRTA GGVRAQAVAR DGSMLDDFAI
DVHGRVTLVR NAPSPAATSS LAIARHIVGL TSVLTR