Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8875 |
Symbol | |
ID | 8672213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 9798586 |
End bp | 9799317 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | ABC transporter-related protein |
Protein accession | YP_003344251 |
Protein GI | 271970055 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0534003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC CGGTCCTGTC GGTCCAGGAG CTCTCGAAGG TGTACGGCGA GGGCGACGCC CAGGTCCGTG CCCTGCGAGG GGTCTCCCTC ACCGTCGAGC GGGGCGACTA CGTGGCCATC ATGGGCGCCT CCGGCTCCGG AAAGTCCACG CTCATGAACA TCCTGGGCTG CCTGGACGTG CCGTCCTCCG GCCGCTACCT CATCGACGGC GCCGACGTCG GGGCGCTGGA GGAGCGCCAG CTCGCCGTCC TGCGCAACCG GAAGATCGGC TTCGTCTTCC AGTCGTTCAA CCTGATTCCC CGGATGAGCG CGCTCGCCAA CGTCGAGCTG CCCATGGCCT ACGGCGGGGT GGGCGCGGCC GAGCGGCGCG CCCGCGCCCT GGCGGCCCTG GAGCAGGTCG GCCTGGCCGA CCGGGTCCGC CACGAGCCGA ACGAGCTCTC CGGCGGGCAG CAGCAGCGGG TGGCCGTGGC CAGGGCGCTG GTCACCGCGC CCTCGCTCCT GCTCGCCGAC GAGCCCACGG GGAACCTCGA CACCACGTCC ACCGGTGACG TGCTGGAGAT CCTCGACCGG CTGAGCGCCT CGGGCCGGAC AATCGTGATC ATCACCCACG AGGACGACGT GGCCGCGCAC GCCAAGCGGG TCATACGCCT GGTGGACGGC CAGATCGTCG AGGACCGCCG CCAGGCTCCC GTCGACGGCC CCCCGCCCCG CATGCCGGAG GTTCCCGCGT GA
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Protein sequence | MTTPVLSVQE LSKVYGEGDA QVRALRGVSL TVERGDYVAI MGASGSGKST LMNILGCLDV PSSGRYLIDG ADVGALEERQ LAVLRNRKIG FVFQSFNLIP RMSALANVEL PMAYGGVGAA ERRARALAAL EQVGLADRVR HEPNELSGGQ QQRVAVARAL VTAPSLLLAD EPTGNLDTTS TGDVLEILDR LSASGRTIVI ITHEDDVAAH AKRVIRLVDG QIVEDRRQAP VDGPPPRMPE VPA
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