Gene Sros_8653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8653 
Symbol 
ID8671990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9547254 
End bp9549254 
Gene Length2001 bp 
Protein Length666 aa 
Translation table11 
GC content72% 
IMG OID 
ProductArabinose efflux permease-like protein 
Protein accessionYP_003344038 
Protein GI271969842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCCC ACCAGTCCGG GCGGCAAGCG CGGCGCACAG GAGGCTTGGG GCTCGTCATC 
GGCGCGCTCA TGCTCGGCAT GCTGCTCGCC GCGCTGGACC AGACGATCGT CTCGACCGCG
CTGCCGACGA TCGTCAGTGA CCTGGGCGGC CTGGGGGAGC TGTCCTGGGT GGTCACCGCC
TACATCCTGT CCTCGACGGT CTCGACGCCC CTGTGGGGCA AGCTGGGTGA CCAGTACGGC
AGGAAGAGCC TGTTCCAGGC CGCGATCGTC GTCTTCCTGG CGGGCTCGGC GCTGTGCGGC
CTGTCGCGGA ACATGGGAGA GCTCATCGGC TTCCGCGCCC TGCAAGGGCT GGGCGGAGGC
GGCCTCATGG TGCTCGCCCA GGCGATCGTC GGGGACGTCG TGCCGGTCCG GGAACGGGGG
AGATACCAGG GGTTCTTCGG CGCGGTGTTC GCGGTCTCCA GCGTCGCGGG GCCGCTGCTC
GGCGGTCTCT TCGTCGACCA CCTGTCCTGG CACTGGGTCT TCTACGTCAA CCTGCCGATC
GGCGTCCTCG CGCTGATCGT GATCTCCTCG GTGCTGCCGT CCGGCACGGA GCGGACACGG
CACACCATCG ACTACCTCGG CATGGTCTTC CTCGGCGGCG GGGCCGCCTG CCTGGTCCTG
ATGGCCACCT GGGGCGGGAC CGCCTATCCC TGGGGCGACC CGGTCGTCGT CGGGCTGGGA
GTCGCCGCGG CGGCGCTGCT GGCGCTCTGG TGGCAGGCGG AGAAGCGGGC GGCGGAACCG
GTGCTGCCGC CGCGCCTGTT CAGGATGAGG GTCTTCAACG TGGCCTCGCT GATCGGCTTC
GTCGTGGGGT TCGCGATGTT CGGCCCGCTC ACCTACATGC CGCTGTTCCT GCAGGTCGTC
CAGGGCGTCT CGCCCACCGC GTCCGGGATC CACCTGCTGC CGATGATGGG CGGCATGCTG
GTGACCTCGA TCGTCAGCGG GCAGATCATC ACGCGCAGCG GGAGATACAA GGTCTTCCCG
ATCCTCGGCA CCGCGATCGT GTCACTCGGG CTCTACCTGC TCTCCCACGT CCACGAGGAC
ATCTCCACCC TCCGGCTCAG CGTCTACCTG CTCGTGCTGG GCGTGGGCAT CGGCCTGGTG
ATGCAGGTGC TGGTGATCGT GGTGCAGAAC GCCGTCGGGT TCGAGGACCT CGGGGTGGCC
ACCTCGGGGG CGACCTTCTT CCGCCTGATC GGCGGCTCGT TCGGTGTCGC GATCGCCGGA
TCGATCTTCA CCTCGCGGCT CACCGACGAC CTGGTACGGC TCTCGCGGAC GGTGAGCATC
CCGCCGGGGA TGGAGAGGAC GGTCCAGTCG GACCCGACGG CCGTCCGGAG GCTGCCGCCG
GAGACCGCCG CGGCGTTCCT CGCGGCCTAC TCCGACGCGA TCGCCCACGT GTTCCTCTTC
AGCGCGCCGG TGGCACTGGT CGCCTTCGCC GCGGCCTGGC TGCTGCCCGA GCTGCCCCTG
CGGGAAACCA CCAAGGCGGC CGACCTGGGC GAATGCTACG GCGCCGCGCC CACCGAGCGC
TCCTCGCTCG CCGAGGTGGA ACGGGGGCTG TGGCGGCTGG CCGACGCGGA CATGCGCAGG
GACTACTACC GCCGCCTGGG CGACATGGCC AACCTGGATC TGCCGCCGGG CGCCGTGTGG
CTGCTCGCGC GCCTGGGCAC CCGGGGCCCC CAGGCGGGCG CGGAGCTCGC CGAGCGGGCG
GGGGTGACGG TCGAAAGAGG CCGGCCGTAC GCGGACCTGC TCGTCGCGCG TGGCCTGGTC
CGCCGGGCCG GCGACGGGGT CCTGGGGCTG ACCCCGGCCG GAGAGCAGGT GGCCGACCGG
CTGGTCACGG AGGCCCGTGA GGGTCTCGGG CGGCTGATCC GGGACTGGAA CCCCGAGGAG
CATCCCCGGC TCCGCGAGCT GCTGGACCGG CTCCCCCACG AGCTGCTCGG CTCGGCGGGC
GATCGCCCGC GGAACGGCTG A
 
Protein sequence
MDAHQSGRQA RRTGGLGLVI GALMLGMLLA ALDQTIVSTA LPTIVSDLGG LGELSWVVTA 
YILSSTVSTP LWGKLGDQYG RKSLFQAAIV VFLAGSALCG LSRNMGELIG FRALQGLGGG
GLMVLAQAIV GDVVPVRERG RYQGFFGAVF AVSSVAGPLL GGLFVDHLSW HWVFYVNLPI
GVLALIVISS VLPSGTERTR HTIDYLGMVF LGGGAACLVL MATWGGTAYP WGDPVVVGLG
VAAAALLALW WQAEKRAAEP VLPPRLFRMR VFNVASLIGF VVGFAMFGPL TYMPLFLQVV
QGVSPTASGI HLLPMMGGML VTSIVSGQII TRSGRYKVFP ILGTAIVSLG LYLLSHVHED
ISTLRLSVYL LVLGVGIGLV MQVLVIVVQN AVGFEDLGVA TSGATFFRLI GGSFGVAIAG
SIFTSRLTDD LVRLSRTVSI PPGMERTVQS DPTAVRRLPP ETAAAFLAAY SDAIAHVFLF
SAPVALVAFA AAWLLPELPL RETTKAADLG ECYGAAPTER SSLAEVERGL WRLADADMRR
DYYRRLGDMA NLDLPPGAVW LLARLGTRGP QAGAELAERA GVTVERGRPY ADLLVARGLV
RRAGDGVLGL TPAGEQVADR LVTEAREGLG RLIRDWNPEE HPRLRELLDR LPHELLGSAG
DRPRNG