| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8627 |
|---|
| Symbol | |
|---|
| ID | 8671963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 9523651 |
|---|
| End bp | 9525312 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Dolichyl-phosphate-mannose--protein O-mannosyl transferase-like protein |
|---|
| Protein accession | YP_003344012 |
|---|
| Protein GI | 271969816 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTCTTG GGTTGCCCGG TTGGAGTGGC CCGTACGATG TCCGGGTGGC CGTGACCGAC
TTCACCAACC AGGCGTCCGA GCAGCCGGAG CCCCAGCCGG ACGGCGAATC GGCGAGCTCC
GTACGAGACC GGCTGGTGCC GCCGATGCGA GGCGACGCCA TGTGGGGCTG GCTGGGCCCG
CTGCTGGTGG CGGCATTCGG GGCGATCCTG CGCTTCACCA ACCTCGGGCG TCCGAACGCG
GTCATGTTCG ACGAGACGTA CTACGCCAAG GACGCGTGGG CGCTGATCAA CTTCGGTGCC
GAGCGGAACG CGCTCAAGGA CGCCGACAAG CTCCTGATGC AGAAGAGCAC GGAGATCTGG
CAGCAGTGCG CGCCGGCCGA GCTCGACAAG TGCGCCTCCT ACGTGGTCCA CCCGCCGCTG
GGCAAGTGGA TGATCGGTGT GGGCGAGCAG GTGTTCGGCA TGACCCCGTT CGGCTGGCGG
TTCGCCGGGG CGCTGGTCGG CGTGGTGTCG ATCCTCATCC TGGCCAGGAC GGCCCGCCGG
ATGACCCGCT CCACCATGCT GGGCTGCCTG GCCGGTTTCC TGCTGGCCAT CGAGGGACTG
CACCTGGTGC TGTCACGCAC CGCGCTGCTG GACATCTTCC TGATGTTCTT CGTCCTGGCC
GGGTTCGCCT GCCTGGTGGT CGACCGCGAC CGGGCGCGCG GCCGCCTGGT CGACTGGTAC
GAGACCTCGC CGCTGAGCGA GCACGGCCCG TGGCTGGGAC TGCGTCCCTG GCGGATCGCG
GCCGGGCTCT GCCTGGGCGC GGCGTGCGCG GTCAAGTGGT CGGGGATCTT CTTCCTGGTG
GCCTTCGCGG TCATGTCCCT GGTCTGGGAC GCCGGGGCCC GTCGGGCGGT CGGGTTGCGC
CGGCCGTACG GCGGCATGTT CGGCAAGGAC CTGCCCAACC TCCTGCTGGC GATGGGCCTG
ATCCCCGCGC TGACCTACAT GGTCTCGTGG AGCGGCTGGT TCGCCTCCTC CTCCGGCTGG
GGGCGCAACT GGGCCCAGGC GACCTCGCAG GGGCCGTTCT TCTTCGTCTT CGACTCGGTC
CGGTCGTGGC TGAACTACCA CTTCCAGGTC CTCGGCTTCC ACACCGATCT GGCGACCCCG
CACAGCTACC AGTCCGAGCC GTGGAGCTGG CCGCTGCTGC TGCGCCCCGT GGCCTTCTTC
TACGAGACGC CCAAGAGCGG ATGCGACGCC TCAAGCTGCT CGCAGGCGGT GCTCGGGGTC
GGCACCCCGG TCATCTGGTA CGGCGGGCTG GCCGCGCTCA TCGCGATGAT CGCCTGGTAT
GTGGCCACCC GCGACTGGCG CGCCGGAGCC GTCCTGCTGA GCTACGCCGC CGGCTGGCTG
CCCTGGTTCT ACTGGGCCAT CGCCGACAAC CGGACCATGT TCCTGTTCTA CGCGATCCCC
ATGGTCCCCT TCATGATCCT GGCGATCGTG CTCGCCGCCG GCCTGATCAT CGGCCCGGTG
AACGCCGCAC CACGACGGCG TATCGTCGGC GCCTCGATCG TGGGCGCCTT CACGCTGCTG
TCGCTCATCA ACTTCTGGTG GCTCTACCCC GTGCTCACCG CCGAGATCAT CCCTTACGCG
GAGTGGCATT CGCGCATGCT CTTCAAGAAG GGCTGGGTCT GA
|
|---|
| Protein sequence | MFLGLPGWSG PYDVRVAVTD FTNQASEQPE PQPDGESASS VRDRLVPPMR GDAMWGWLGP
LLVAAFGAIL RFTNLGRPNA VMFDETYYAK DAWALINFGA ERNALKDADK LLMQKSTEIW
QQCAPAELDK CASYVVHPPL GKWMIGVGEQ VFGMTPFGWR FAGALVGVVS ILILARTARR
MTRSTMLGCL AGFLLAIEGL HLVLSRTALL DIFLMFFVLA GFACLVVDRD RARGRLVDWY
ETSPLSEHGP WLGLRPWRIA AGLCLGAACA VKWSGIFFLV AFAVMSLVWD AGARRAVGLR
RPYGGMFGKD LPNLLLAMGL IPALTYMVSW SGWFASSSGW GRNWAQATSQ GPFFFVFDSV
RSWLNYHFQV LGFHTDLATP HSYQSEPWSW PLLLRPVAFF YETPKSGCDA SSCSQAVLGV
GTPVIWYGGL AALIAMIAWY VATRDWRAGA VLLSYAAGWL PWFYWAIADN RTMFLFYAIP
MVPFMILAIV LAAGLIIGPV NAAPRRRIVG ASIVGAFTLL SLINFWWLYP VLTAEIIPYA
EWHSRMLFKK GWV
|
|---|
| |