Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8540 |
Symbol | |
ID | 8671874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 9420435 |
End bp | 9423104 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | Zinc metalloprotease (elastase)-like protein |
Protein accession | YP_003343925 |
Protein GI | 271969729 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.810503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.747593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTACGAC CCCCCGCCCT CCTCGCCGTG GCGGCGACCC TGACCACGGC GCTCTCCCTC GTGACAGGAG GTCCCGCCCA GGCCGCCGAT CCACCTCCGG CCCAGGTGGA GACCCGTACC GGGACGGATG CCCCGGCTCT CGTGAGCGGC CTCGCCGAGG CGCCCAGGAA CGGTGATCCC GTCGCCGTCG CCCGGGGCCA TCTGCGCGAC GGACGGTACG GGATAAAGAA TGTGGACACC GATCTGGCGC CACTCGACGT CGTCCGCGAC GGCGCCGACG AGACCGTGCG ATTCGAGCAG CGTCACCAGG GCGTCCGCGT GTTCGGCGCC CACTATCTGG TGCAGATGAG CAAGGAGGGC GACGCCCACA AGGTCACCGG GGCGGGTGGC CGCTTCCTCA CCCGCCTGAA CGTCTCGACC ACGCCGAGGT TCCCCCAACG GCTCGCGCTG AACGTCGCGC GGTCCCGGGT GGCCGCCGAG AGCGGCGGCG ACAAGGCCGG CCTCACCGCG GAGCCCGGCG GGCTCACCGT CGTCCCGGTG GGCAAGGGCC TGCTGGCCTG GCAGGTCACC GTCCGCGGGA CGGACGCGCG GAAGCGGATG CCGCTGCTCG CCGACGTCTA CGTCGACGCC CGGACCGGCG CGCCGCTGTT CGCCTCCAGC CGGATCCGCA CGGTGGCCGA GGGCCCGGTC GTCACCTCGG GCACGACGGT CCGGGGCAGG AACGTGCCGC TGAACGCCCA CCAGAGGGCC GACGGGAAGT ACGAGCTGCG TGACCGCGCG CGGGCGATGT GGAACGGCAC CACCGGGGAG ATCCTCACCT ACGACGGCCA GGAGCGCGAC GTCTACGAGT TCCTGGGCGA ACTCCCGGCC GACACCCCCG TCGTCGACTC CGACACCCCC GCCTTCACCG GCAAGGCCTC CGAGATCGGC GCGGTGGACG CGCACTGGGG GGCCGGCCAG GTCTACGAGT ACTACCGGCG GCTCGGCCGG AACGGCCTCG ACGGCGAGGG CGGCTCGATG AGCTCGGTCG TCAACGTCAC CGACTCCGGG CGCCCCTTCA TCAACGCCTT CTGGGACGGC GCGAAGATGG TGTACGGCGG AGGTGGGGAC GCCGCCTACT CGCTGGCCTC GGCGCTCGAC GTGGTCGGCC ACGAGATGAC CCACGGCGTG GTCGAGCACA CCGCCGGCCT GGTGTACTTC GGCCAGCCGG GCGCGATGAA CGAGGGCCTG GCCGACTACT TCGGCAACGC CGTACAGGCG GAGGTCGAGG GGATCGACCT CGCCGACCCC GACGCGGGCC TGCTGGGCGA GTCGTACTGC CGCACCCTCC CGCCACGCGA GTGCGCGTTC CGCGACCTCA ACGACGGGCG CACCGGGCCC GCCGACTACG TGGGCGCCAC CGGCCGCATC GACAACGCGG GCGTCCACCT GAACTCGACG ATCTTCAGTG GCGCCCTGTG GGACATCCGG GAGAAGCTGG GATCCAGGAC CGACAAGATC GCGTACAAGG CGCTGTCGGA GTACATGACC CCGCTCGACG ACTTCACCGA CGGCCGGCGC GCGGTGCTCG CGGCCGCCGC GCGCATGCGG CTGGGCGCCA AGGACCTGCT GACGATCGCG CGCGCCTTCG ACGCCCACGG CATCAAGGCG GGCTGGGAGC GGCGCATCCC CACCGACCAC GACGTCCTGC TGCGCGGCAT CACCGACCTC TACGCCCAGC CCGACGCGGC CGGCGACCGT TACGTGATCA CCAACTCCTC GGCCGACCTG TCGGCGCCCC CGGCCGTGTA CACCGGCCGG GTGCGCGGCG GCCGGGCCGA GCTGCTCTCC GCTCCGGGCG AGCAGTACAA CTTCGCTCCG GCCACGGACG GCAGGACCGG GGCCTGGGCG ACCTACGTCG ACACGGGGAC CGCGTGGAAG ATCCAGGTGT GGAGCCGGCC GCTGGACCGC TCGCGTCCGC CCGCGCTGGT GCACGAGGGC GACGAGGACG TCCTCAACGT GGCGGTGGAG GGCGACACGG TCGCCTACTC GCTCTGGGAC CCCGCGACGG GCGGCTACGA CCTGTGGGTC AGGAGGGGCG GCGCCGCCCC GGTCAACCTG ACGCCCCAGG AGGGGGTCTT CAGCAGGGCG CCGTCGATCC GGAACGGCCG GATCGCCTAC GTCAAGCTGT ACCTGCGGGA GGGCCCCCGC CGGATGCTGG TCGCCACCCG CGACCTCGCC TCGGGGCAGG AGACCGAGCT GCCCGCCCCG CAGGGCCCGC CCAACGTGAT CGGGCTCACC GCCGCCCCCG TGCTGACCGG CTCCCACCTG GTCTGGCTGG AGGACGCCCA GCAGGACGGC AGGGCGGGCA TCATGCGCGC GAAGGCTGAC GGCAGCGCCC CGGCGGTGGT GGTCCCCGAC GACGCGTCCG CGCTGGAGCT CCTGGACATG GACGCCACGG ACACGGCCAT CACCTACAGC ATCTACCCCG ACCTGTCGGT GCCCTCCAAC GAGAACCTGC CCAAGATCAC CCAGATCCCG GCGGCGGGCG GCACGCCGGT GCGGGTCACG TGCAACCGGG GCGAGCAGGC CCAGTTCGCG GCGGTCGAGG GCGCCCGCGT GGTCTGGGTG GACGGCACCG CCGCCCACAT CGACCTGGCC ACCCGGGCAC GTCCGAGAGG GGGCTGCTGA
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Protein sequence | MLRPPALLAV AATLTTALSL VTGGPAQAAD PPPAQVETRT GTDAPALVSG LAEAPRNGDP VAVARGHLRD GRYGIKNVDT DLAPLDVVRD GADETVRFEQ RHQGVRVFGA HYLVQMSKEG DAHKVTGAGG RFLTRLNVST TPRFPQRLAL NVARSRVAAE SGGDKAGLTA EPGGLTVVPV GKGLLAWQVT VRGTDARKRM PLLADVYVDA RTGAPLFASS RIRTVAEGPV VTSGTTVRGR NVPLNAHQRA DGKYELRDRA RAMWNGTTGE ILTYDGQERD VYEFLGELPA DTPVVDSDTP AFTGKASEIG AVDAHWGAGQ VYEYYRRLGR NGLDGEGGSM SSVVNVTDSG RPFINAFWDG AKMVYGGGGD AAYSLASALD VVGHEMTHGV VEHTAGLVYF GQPGAMNEGL ADYFGNAVQA EVEGIDLADP DAGLLGESYC RTLPPRECAF RDLNDGRTGP ADYVGATGRI DNAGVHLNST IFSGALWDIR EKLGSRTDKI AYKALSEYMT PLDDFTDGRR AVLAAAARMR LGAKDLLTIA RAFDAHGIKA GWERRIPTDH DVLLRGITDL YAQPDAAGDR YVITNSSADL SAPPAVYTGR VRGGRAELLS APGEQYNFAP ATDGRTGAWA TYVDTGTAWK IQVWSRPLDR SRPPALVHEG DEDVLNVAVE GDTVAYSLWD PATGGYDLWV RRGGAAPVNL TPQEGVFSRA PSIRNGRIAY VKLYLREGPR RMLVATRDLA SGQETELPAP QGPPNVIGLT AAPVLTGSHL VWLEDAQQDG RAGIMRAKAD GSAPAVVVPD DASALELLDM DATDTAITYS IYPDLSVPSN ENLPKITQIP AAGGTPVRVT CNRGEQAQFA AVEGARVVWV DGTAAHIDLA TRARPRGGC
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