| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8460 |
|---|
| Symbol | |
|---|
| ID | 8671794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 9334649 |
|---|
| End bp | 9335833 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Serine phosphatase RsbU regulator of sigma subunit-like protein |
|---|
| Protein accession | YP_003343847 |
|---|
| Protein GI | 271969651 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCCCC GATCTCGCAA AGAGGCGTCA GTGACCGCCC CTCCCCATGA CACGCTCACG
ATCCTTCTCA TCGAGGACGA CGCGGGCGAT GCCTTCCTCG TGGAGGAGCT GCTCGGCGAG
TCGGACGATC CACCGAAGAT CATCTGGGTG CGCAGCCTGG CGGAGAGCCG GGTACGGCTG
ACACAGGACG TGCAGTGCGT GCTCGTGGAC CTCTCGCTGC CCGACGCGAC CGGCCTCGAA
GCGCTGGAGC AGGTGCTCTC CATGGCGCCG CACGCCGCCG TGCTCGTGCT GACCGGGCTG
AACGACACCC ACGTGGGCGC GGAGGCCGTG GCCGCGGGCG CCCAGGACTT CCTGGTCAAG
CAGGACGTGG AGGCCCGGCT GCTGGCGCGG GCGATCCGCT ACGCGATGGA GCGCAAGCGC
GCCGACCTGG CCCAGCGCAG GCTGGTCGAG GCCGAGCTGC TCACCAAGGA GAACTCCCGC
CTCGAACGCG GGCTGCTGCC GGTGCCGCTG CTGGAACCCG GGCTCCTGGA GCACCAGGCC
CGCTACCTGC CCGGCCGCCG CCGGGCCCTG CTCGCCGGCG ACTTCTGGGA CACCGTGCAG
AGCCCCGACG GCGCCGTGCA CGTGGTGGTC GGCGACGTGT GCGGGCACGG CCCGGACGAG
GCCGCGCTGG GCGTCGCGCT GCGGATCGCC TGGCGGACCC TGGTCCTCGC CGGGCACACC
GGCAATGAGC TGCTGCGCAC TCTCGACTCG GTGCTCCGCC TCGAACGCAA GTCCGCGGAG
ATCTTCACGA CGCTGTGCAT CGTCACGATC GACCCCGCGC TCGGCACCGC GCGCATGCAC
GTGGTCGGCC ACCCGCCGCC CCTGCTGATC CGCGACGGCG TGATCGGCGT GGTCCAGGGC
ACCCCCTCGG GGCCGCCGCT CGGCATCTTC CAGGGCGTCG ACTGGTCGGA GATCGAGGTG
CCGCTGGGCG CCGACTGGTC CCTGCTGCTC TACACCGACG GCCTGATCGA GGCCACCGTC
GGCGGCGGCC CCGACCTGCT CGGGACCGAG GGCCTGCTCC GCCTGGTCCA CGAGCAGGGC
GGGATCCACC TCGACCGGCT CATCGACCGG GTGATCGAGC TGAACCAGGA CGCGCTCAGC
GACGACCTCG CGGCCGTGCT CATCTCACGC GGCGAGAAGC GTTGA
|
|---|
| Protein sequence | MSPRSRKEAS VTAPPHDTLT ILLIEDDAGD AFLVEELLGE SDDPPKIIWV RSLAESRVRL
TQDVQCVLVD LSLPDATGLE ALEQVLSMAP HAAVLVLTGL NDTHVGAEAV AAGAQDFLVK
QDVEARLLAR AIRYAMERKR ADLAQRRLVE AELLTKENSR LERGLLPVPL LEPGLLEHQA
RYLPGRRRAL LAGDFWDTVQ SPDGAVHVVV GDVCGHGPDE AALGVALRIA WRTLVLAGHT
GNELLRTLDS VLRLERKSAE IFTTLCIVTI DPALGTARMH VVGHPPPLLI RDGVIGVVQG
TPSGPPLGIF QGVDWSEIEV PLGADWSLLL YTDGLIEATV GGGPDLLGTE GLLRLVHEQG
GIHLDRLIDR VIELNQDALS DDLAAVLISR GEKR
|
|---|
| |