Gene Sros_8420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8420 
Symbol 
ID8671754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9291536 
End bp9292318 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative transcriptional regulator, PaaX family 
Protein accessionYP_003343808 
Protein GI271969612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.289328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCC GTGCCGCTCT CTTCGATCTG TATGGGGACC ATCTGCGGTC CCGAGGCGGT 
CGCGCGTCCG TAGCCGCCCT CGTCCGCCTG CTCGCACCGT TGGATATCGC CCCTCCCGCC
GTCCGTACCG CCGTCTCGCG GATGGTGCGG CAGGGCTGGC TGACCCCCTC CCGGCTGCCG
CAGGGGCCCG GCTACGAGGT CACCCCCAGA TGCGTGCGCC GTCTCGACGA GACGGCGCTG
AGAATTTACC GAGTTGGGAC GATCACCTGG ACGGGCCGGT GGCACATGCT CGTGGTCGAA
CCGGTGCGCG AGCGGCCCCG CCGGGAGCGC CTGAAGGCCG ATCTGGCCTT TCTCGGCTAC
GCCCCGCTGT CGGAGACGAC CTGGATAGGT CCGCGCCCCT CCCCCGAGCT CGGCGCGCTC
CTCGCCGGGG AGGACATCCA CGCCGACCGG TTCGACGCGG TGCTCGACGG CGACCCCAGG
GCGCTGGTCG CCAGGACCTG GGATCTGGAG AGCATCGGCT CGGCCTACGA GGAATGGCTG
TCCCGGGCGG TCGACCTGGT CGGCGCGCTG CCCGGCGACG CCGCCGACGA CCGGGTGTTC
GCCACCCGGA GCAGGCTGCT GCACGGCTGG CGCAACTTCC TGTTCCGGGA CCCCGGGCTC
CCCGCCGACC TCCTGCCGCC GGGCTGGCCC GGCGAGAAGG CCAGGGCCTA CTTCGAGCAG
GAGGCGGCCC GCCTGCTCCC CGCCGCCGCC GCGTTCGTCG ACCACCATCT GACCGAGCCG
TAG
 
Protein sequence
MNARAALFDL YGDHLRSRGG RASVAALVRL LAPLDIAPPA VRTAVSRMVR QGWLTPSRLP 
QGPGYEVTPR CVRRLDETAL RIYRVGTITW TGRWHMLVVE PVRERPRRER LKADLAFLGY
APLSETTWIG PRPSPELGAL LAGEDIHADR FDAVLDGDPR ALVARTWDLE SIGSAYEEWL
SRAVDLVGAL PGDAADDRVF ATRSRLLHGW RNFLFRDPGL PADLLPPGWP GEKARAYFEQ
EAARLLPAAA AFVDHHLTEP