Gene Sros_8378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8378 
Symbol 
ID8671712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9248947 
End bp9251742 
Gene Length2796 bp 
Protein Length931 aa 
Translation table11 
GC content73% 
IMG OID 
ProductPutative glycosyl/glycerophosphate transferase involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC- like protein 
Protein accessionYP_003343766 
Protein GI271969570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGG TGCTGGCCGA GGGGCTGACC CCGGCCGAGC GCCGCAGGTT CGACGCCGAC 
GCCCTGGCCG GTCCGCTCGG TTCCCGGCTG GACCTGGCGG TCAAGCGCGG CGCCGCCCGC
CGGCGCGAGT TCGTCACCCT CTTCAAGCCC TACATCGCCG CCGCCGACGC GCGGGTCAAG
CGTGATCTGC CGGTGGCCCG CAGGATCGCC TTCCACCTGG TCGAGCACCG GGAGGTGGAC
GACCTCGCCG ACGGCGACGC GCTGCAGAAG ATCGCCGCGG CCGCGGCGGA GCCGTCCAGG
CGGGTCCGCA GGAAGCTGCG CTGGTATGCG GATCTGCCGC TCCAGGACGA GCTGCCGGAG
GCCATGTTCC GGCTGCGGGC CGCCGACCTG ATCCCGATGA CCCAGGTCGA GGACGTCTCC
TGGTCCGGCG GTCGGTTGCG GATCAGCGGC CACGCCTACC TGGCCGGGCT CTCGGTCCGC
GGCCCCCGCT TCAACCGGGC CGTCGTCGTG CTGCGCGGCC CCCGCTGGCT GCCCCCGGTA
TGGCTGCGCA CCCGCAGGGT CTTCCATCCG GAGGCCACCT ACGGCGCCCA GGAGGCCGGC
TGCAACTACG ACTGGTCCGG TTTCACCGCC GAGCTGCACC CGTGGTCGCT GCGCTGGCGC
GCGGGCGTGC GGGCCGTCGT GCGCGGCGGC AAGCGGCTGC TCCGCCGCCG GGCCGTCGTG
CGCGACACCA CCACCTGGCG CGCCGAGATC GTGATCTGGA GCCGGGGCGC CCGCGCCACC
GGCCTGCTCC GCGGCCCCTC CATCGGCCGT ACCGAGCGTC CCCGGGGTCT GGATCTCGGC
CGCGGCTGGT GGGTCCGCCC GGTCTGGACC TCCGACCGCG CCCTCCAGGT CGTGCTGCAG
CCCACCCGGG CCGAGCTGAC AGGGGTGCGG CTGGACGGCG ACCGGCTGGA GCTGAAGGTG
TTCCTGCCGG GCAGGGGGCA GGGCAAGGGC CACGCGCGCC TGGACGGCCA CCGGATGTCG
GCCGACTTCA CCCCCGTGGA GGGGGGCACC GAGGTCGTCG TGCCGCTGGC CGTACCGTCA
CTGCTGCAGG AGCGTGACGG CGGCCGGCTC TGGATCGAGC CCAAGGGCGA CCCCGCGGCC
GCCGTCATGC TCGGCCGGGC CGCGGAGAGC CGTTCGGTCG TCGGCGAGCG GGAGATCACC
GTGCTGGGCG ACCGGCGTGA CCGGGTGATC GTCTCCGCGC ACCGGATCCG CCCGGTCGTC
TCCGCGGTGA CCTGGGGCGA CGACGGCGTG CTCACCCTCG AAGGCTCGTA TCCGGGCTCC
GGGCCGGCCG AGCTGACCCT CCGGCACCGC ACCGGACTGA TCCACACCGT GGCGTTGGAG
CGTGCCGACT CCCGTTTCTC GGTGCGGTTC GCACCCGCCG CGATGCCCCG TTTCGGGGAG
ACCGTGCCGC TGGGCAGCGG GAGCTGGAGC ATGGCGGTCC GCGACTCCTC CGGGCAGATC
GTGCCGCTCC GCGTCGACCA CGCCATCCTC GACTCGCTGG ACGAGGACCC GAAGGTCCGT
GACGGCCGGG AGTACCGCCT GATCTCCACC AGGTTCGACG TGCCGGTGCT GACCGTCGCC
GAGGACCTGC CCGACGACGA GCGGGGCGCC GGCGGCCTGT ACGCGCTGCG ACGCTCGTTC
TACCCCGCCG AGCGGGCCCG CGAGCTGAAC GACGCGACCG TCTACGTCGC CTACGACGGG
CGGCAGTACG AAGGCAACGT CCGCGCGATC TACGAGGAGC GGATGCGGCG CGGCGACGAC
CGCGAGCACA TCTGGGTGGT CAAGGACGGG GCGTTCGTGC CCCCGGCCTC GGCCGATCTC
GGGTTCGGCT CGGACGTCCG GCCGACCGTG GTCCGCGCGG GCAGCAGGGA GCACTACGCC
GTGCTCGCAC GCTCGCGGCA CGTGGTGACC AACGGCTTCC TGCCGCCGTG GTTCCGGGCG
CGCGAGGACC AGACGGTCGT GCAGACCTGG CACGGCAGCC CGCTCAAGCG CCTGGGCAAC
GACCTGCCGC ACATGTCCCG CGATCCGAAG CCGCCTGCCT GGCACCGGCA GGCCGTGGAG
GTGCGGGGCT GGGACCTGCT GGTCTCGCAG AGCCCGTGGG CGACCCCGAT CCTGCGCAAG
GCGTTCGGCT ACCAGGGCGA GGTCCTGGAG AGCGGTTACC CCCGCAACGA CGTGCTGTCC
GCCCCCGACA GGGACGAGCT GGCCGCGCGG GTGCGCCACC GGCTCGGCAT CGCCGAGGGC
GTCAGACTGG TGCTCTACGC GCCGACCTTC CGCGACTACG ACCGAAAGAA CGCCTCGCTC
CGGCTGGACC TGGCCGAGGC GCGGCGGGTG CTCGGCCCCG GCTACGAGTT CCTGATCAGG
GCGCACTCGA TGCAGGCGTC GCCCAACGTG CCCCAGGGCC TCGGGCGTGA CGTCACGACT
TATCCGGATA TGGCGGATCT GTTGCTGATC GCCGACGTGC TGATCACCGA CTACTCCTCC
GTCATGTTCG ACTTCGTCGC CACCGGGCGG CCCGTGCTCT TCTTCACCCA CGACCTGCAG
CGCTACTCGT CCAAGCGCGG CCTCTATCTC GACCTGGCCG CCGAGGCCCC CGGGCCGCTG
CTGACCACCG GCGCCCAGGT GATCGAGGCC GTCCGGACGA TCGACGAGGT GAGCGCCGCG
CACGCCGAGC GGTACGAACG GTTCCGGCGC GTCTACGCTC CCCGCGACGA CGGCAAGGCG
ACAGCCCGGC TGGTCGACCA CGTCTTCGTC GCCTGA
 
Protein sequence
MAAVLAEGLT PAERRRFDAD ALAGPLGSRL DLAVKRGAAR RREFVTLFKP YIAAADARVK 
RDLPVARRIA FHLVEHREVD DLADGDALQK IAAAAAEPSR RVRRKLRWYA DLPLQDELPE
AMFRLRAADL IPMTQVEDVS WSGGRLRISG HAYLAGLSVR GPRFNRAVVV LRGPRWLPPV
WLRTRRVFHP EATYGAQEAG CNYDWSGFTA ELHPWSLRWR AGVRAVVRGG KRLLRRRAVV
RDTTTWRAEI VIWSRGARAT GLLRGPSIGR TERPRGLDLG RGWWVRPVWT SDRALQVVLQ
PTRAELTGVR LDGDRLELKV FLPGRGQGKG HARLDGHRMS ADFTPVEGGT EVVVPLAVPS
LLQERDGGRL WIEPKGDPAA AVMLGRAAES RSVVGEREIT VLGDRRDRVI VSAHRIRPVV
SAVTWGDDGV LTLEGSYPGS GPAELTLRHR TGLIHTVALE RADSRFSVRF APAAMPRFGE
TVPLGSGSWS MAVRDSSGQI VPLRVDHAIL DSLDEDPKVR DGREYRLIST RFDVPVLTVA
EDLPDDERGA GGLYALRRSF YPAERARELN DATVYVAYDG RQYEGNVRAI YEERMRRGDD
REHIWVVKDG AFVPPASADL GFGSDVRPTV VRAGSREHYA VLARSRHVVT NGFLPPWFRA
REDQTVVQTW HGSPLKRLGN DLPHMSRDPK PPAWHRQAVE VRGWDLLVSQ SPWATPILRK
AFGYQGEVLE SGYPRNDVLS APDRDELAAR VRHRLGIAEG VRLVLYAPTF RDYDRKNASL
RLDLAEARRV LGPGYEFLIR AHSMQASPNV PQGLGRDVTT YPDMADLLLI ADVLITDYSS
VMFDFVATGR PVLFFTHDLQ RYSSKRGLYL DLAAEAPGPL LTTGAQVIEA VRTIDEVSAA
HAERYERFRR VYAPRDDGKA TARLVDHVFV A