Gene Sros_8309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8309 
Symbol 
ID8671637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9170888 
End bp9171607 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative transcriptional regulator, GntR family 
Protein accessionYP_003343700 
Protein GI271969504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0848138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGACG ACTCCCCCAG GATTCCCAAG TACTACGACG TCAAACGTAG TCTGCTCGCG 
CTGACCAAGT CCCTGTCGGC GGGCAGCGCG CTGCCCCCCG AGCGGACCCT GGCGGTGCGC
TTCGAGACGT CGCGCACCAC CGTGCGGCAG GCGCTGTCGG AGCTGGTGGT CGAGGGCCGC
CTGGTGCGCA TCCAGGGCAA GGGAACGTTC GTCGCGCACC CCAAGGTCGC CCAGGTCCTC
CAGCTGACGT CCTACACCGG CGACCTGCGG ACCGTCGGCC TCGAACCCGA CACCAAGATC
CTCGACATCA GCTACATCAC CGCCGACGAG CCCCTGGCGC GCCGGCTGGC GATCAACCCC
GGCGGCCGGG TGCTGCGCAT CCACCGGCTG CGCCTGGCCA ACGGCGAGCC GATGTCGATC
GACACCACCC ACCTGTCGGC CCGGCGCTTC CCCCGCCTCC GGCGCGAGCT GGAGGTGCAC
TCCTCCCTGT ACGAGACGCT GCACAACGCC TACAACGTGC GGCTGACAGA CGCCGAGGAG
ATCATCGAGA CCGTGCTGGC CACGCCGTAC GACGCGCAGG TGCTGAGCGT CGACGTCGGC
CTGCCGATGC TGCTGCTCAC CCGGCACGCC TTCGACGCCG ACGGCAATCC GGTGGAGTGG
GCCCAGTCCC TCTACCGCGG CGACCGATAC AAGTTCGTCA CCCGCCTGCG CCGTCCCTGA
 
Protein sequence
MTDDSPRIPK YYDVKRSLLA LTKSLSAGSA LPPERTLAVR FETSRTTVRQ ALSELVVEGR 
LVRIQGKGTF VAHPKVAQVL QLTSYTGDLR TVGLEPDTKI LDISYITADE PLARRLAINP
GGRVLRIHRL RLANGEPMSI DTTHLSARRF PRLRRELEVH SSLYETLHNA YNVRLTDAEE
IIETVLATPY DAQVLSVDVG LPMLLLTRHA FDADGNPVEW AQSLYRGDRY KFVTRLRRP