Gene Sros_8065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8065 
Symbol 
ID8671393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8884005 
End bp8885756 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content74% 
IMG OID 
Productsignal transduction histidine kinase regulating citrate/malate metabolism 
Protein accessionYP_003343463 
Protein GI271969267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACGCA TACTCAACGC CTCCCTCGGC ACCCAGCTGT TCGTGCTGCA GACGGTGATC 
GTGTTCCTCG CGGTGGGCGG TACGGCGGGC GTCTGGATGG AACACACCCG CAGCCAGCTC
GACCGGCAGT ACCAGCAGCG CGCGCTGGCG ATCGCTGAGT CCGTCGCAGG GCTTCCCCAG
GTCCGCGAGG CCTTCGCGCG CCCCCGGCCG GAGCTGAGCC TGCAGCCGAT CGCCGCCGGG
GTGCAGGCGG CCACCGGCGC CGACTACGTG GTGATCGCCA ATCGCGAGCA GATCCGCTAC
GCGCACCCCA ACACGGCCCT GATCGGCAAG AGGCTGTCCA CCGACGGCTC GGAGATCCTG
AGCAGCGGCC ACGCCTGGAC CGGCATCCAG ACCGGCACCC TCGGCCGCTC CGTGCGCGGC
AAGGCCCCGA TCTTCGACTC CTCCGGCCGG GTCATCGGCC TGGCCTCGGT CGGCGTGCTC
CAGGACACCG TCGCCGACGA GCTCGGCTCG GCGCTGCCGC CGCTGCTGTG GACCGTGCTC
GCCGTACTCC TCGCCGGGTC GGCGGCCACC GGGCTGATCG CCCGGCGGGT CCGCCGGCAG
ACCTTCGGGC TGGAACCCCG GGAGATCGCG GCCCTGCTCG AACAGCGCGA GGGGGTGCTG
CACGGCGTGA AGGAAGGGGT GCTCGCCCTT GACCTCCAGG GCCGGGTGAC GCTGGTCAAC
GACGCGGCCC GCGACCTGAT CGGCCTCTCC GCCCACGACG TGGGCCGGGA ACTGCGTGAG
ATGCCGCTGT CGGACCGGAT GCGAGACGTG CTGGACGGCG TGGACTCCGG CGACGACCGG
GTGGTGCTCC ACCGCGACCG CGTGCTCGTG CTCAACCGCA CCCCGGTCGC GGTCCGCGAC
CAGCAGAGCG GCTGGGTGGT CACCCTGCGC GACCGGACCG AGCTGGTACG GCTGGCACAC
GAGCTCGACC AGGCCAGCAG CACCACCGAC GCGCTGCGCG CCCAGGCCCA CGAGTTCGCC
AACCGGATGC ACACCGTGGT CGGCCTGCTG GAGCTCGGCG AGCACGACAT GGCCGTCAAC
TACATCACCC AGACCTCCGA GGCCTACGGT GTGTACGCGT CCGGCATCCG GGAGAAGGTC
GCCGATCCGA CCCTGGCCGC GCTGCTGCTG GCCAAGTCCG CCGAGGCGGC CGAGCGGGGC
GCGTCTCTGC TGCTCGCCGA GGACTCCCGG GTGGAGGAGG GCGTGCTCGG CGACCCCCAT
GACGCCGTGC TGGTGGTCGG CAACCTGGTG GCCAACGCCC TCGACGCGCT GGAGGAGATC
GGCGGCACGG TCGAGGTCTC GGTCCGCACC GAGACCGACG GCCTGCACGT CCGGGTCGGC
GACTCCGGTC CGGGGATCAC CCCCGGCCTG GCCGAGGAGG TCTTCCGCGA GGGCTTCACC
ACCAAGATCG CACACGCGGG CCCGCGCGGC CTCGGACTCG CCCTGACCCG CCAGGCGTGC
TCGCGCCGGG GTGGCTGGGT GCGGGTGCAC AACGCCGGCG GCGCCGTCTT CACGGCCCTG
CTGCCCCGTC GCGAGGACCC CGAGGGGGCC CGGCCGCGGG GAAGCGGGAC GGGCGAGCGG
CGGAGGGACG GATCGGACGG GCGGCGGGAG AGCGGGACGG CCGGGCAGAG GGAGAGTGGG
ACGGGCGAGG AGAGGGAGAG CGGGACGGGC GGCGGGCGGG GCCGGGTCAC GGACGCGGAG
GTGTCGTGGT GA
 
Protein sequence
MRRILNASLG TQLFVLQTVI VFLAVGGTAG VWMEHTRSQL DRQYQQRALA IAESVAGLPQ 
VREAFARPRP ELSLQPIAAG VQAATGADYV VIANREQIRY AHPNTALIGK RLSTDGSEIL
SSGHAWTGIQ TGTLGRSVRG KAPIFDSSGR VIGLASVGVL QDTVADELGS ALPPLLWTVL
AVLLAGSAAT GLIARRVRRQ TFGLEPREIA ALLEQREGVL HGVKEGVLAL DLQGRVTLVN
DAARDLIGLS AHDVGRELRE MPLSDRMRDV LDGVDSGDDR VVLHRDRVLV LNRTPVAVRD
QQSGWVVTLR DRTELVRLAH ELDQASSTTD ALRAQAHEFA NRMHTVVGLL ELGEHDMAVN
YITQTSEAYG VYASGIREKV ADPTLAALLL AKSAEAAERG ASLLLAEDSR VEEGVLGDPH
DAVLVVGNLV ANALDALEEI GGTVEVSVRT ETDGLHVRVG DSGPGITPGL AEEVFREGFT
TKIAHAGPRG LGLALTRQAC SRRGGWVRVH NAGGAVFTAL LPRREDPEGA RPRGSGTGER
RRDGSDGRRE SGTAGQRESG TGEERESGTG GGRGRVTDAE VSW