Gene Sros_8060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8060 
Symbol 
ID8671388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8875661 
End bp8878273 
Gene Length2613 bp 
Protein Length870 aa 
Translation table11 
GC content73% 
IMG OID 
Productsignal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein 
Protein accessionYP_003343458 
Protein GI271969262 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGCTCG TTGCCGCCCT TCTCAGTGGT GTCTCGCCCG GGACCGTCGG AGCGGTGGCG 
GGTGTCGTCG CCGCCGCGAT CGCCGCGGTG TCACTGTTCG CCGGGCTTCT CCGGGGCGCC
GACCGGCGCA GGGCGACGGC GGTCCGGTGG CTGGCCGGTG GCTCGGTCAC CTGGCTGGTC
GGGGTCGGTG CGCGGCCGCT CGCGGACGGC ACGCCCTTCG CCGTGTCCTT CGCCGACCTG
GTGGTCCTCG TCGGTACGGC GATGCTCACC GTCGGCACCG GGCTGTCCGC CACCCGGCCC
GCGCACGGGC GTGCCCTGCT GCGGGATCTC GCCGACTCCT ACATGTGCGC CGGCTCGCTG
TTCGTGATCG GCTGGGTCCT GCTGCTGGGC CCGTCCTACC GCCAGGCCGA CGACGCCGGC
ACCTTCGCGA TCACCATCGC CCCGCCGCTG CTCTGCCTGA TCCTCGCGTG CGCCGTGGGC
CCGGCGGTGC TGCCGATCCG GCGGTCCGCC TGGCCGATGG GCCTGGCGGC GCTGGCCGTG
CTGGCCGCCA TCACGGCGTC CGAGACGGGC ACCGCGCTGG CCCGCGTGAG CGGCGACGCG
CCGCCGCTGC TCGGGGTGTG GCTGGCTCCG GCGGCCTTCC TGCTGCTGGC CGTCGTCCCG
TGGAGCGGCC GTACGGCGCC CGCCGCGGGC CCCGACGACG AGGAGGAGGA GCCGTCCGTC
GGGCAGGCCA CCTCCTGGCT GATCGCGGCC CTGCCGCTGA TCCTCGTCGT GGCGGCCACC
GGGGTCGTGC TCCTGCGCGT GCTCGGCGGC AGGGTGCAGG GGCCGGTCCC GGTCCTCGCC
CTGGTGTCGA CGTCGATCGT CTGCGTCCTG GTGGTGCGCC TGTTCGTGGT GCTGATGGAG
ACGGGCCGGA TGCGGCGCCT GGTGGATCTC GGCGAGCGGC AGCTCCAGGA CCTGGCGGAG
AGCACCGGCG ACGTGGTCCT GCTGTGCGAC TACGACGGCG TGGTGCGGGA GATCGGCGAG
GGCGTCGAGA TCACGTACGG CTACCGCCCC GACGAGCTGG TCGGCGGGAC GATCTTCGAC
TACATCCACC CCGAGGACGT GCCCGGGATC CAGGTGGCGC TGCGCGCGAT GAGCCTGGAC
GAGGAGCCGG TCGAGGGGCC GGGCACCTGC ATGATCGCCT GCCGGGTCCG GGCGTCCGAC
GGCACCTGGC GGCCCACCGA GTCGGTGGCC ACCCGGCACG TGCGCGGCGA GGACCTGCTG
CTGGTCACCA CCCGCGACGT CAGCGACCAG GAGGCCCTGC GCAACCAGGT CGCCCACCTG
ACCTTCCACG ACGGCGTCAC CGGTCTGCCC AACCGGGCCT ACTTCGAGGA GCGCACCCGC
GAGGTGCTGG CCCGTCCGGG CGCGAGCAGC GCCGTGGTGG TGTTCCTGGA TCTGGACGGC
TTCACGGCGG TCAACGACTC GGTCGGCCAC GCCAGCGGCG ACTATCTGCT GGGCCAGGCC
GCCCGCAGGC TCCGCGCCGC CGTACGGGCC GACGACACCC TGGCCCGCTG GGGCGGCGAC
GAGTTCGCGG TGCTGCTGGA GGCGGCGGTG GACGCCCAGA CGGCGGTGGA TCTGGCCGAG
CGGCTGGTCC GCACGGTCTC GTCCGAGCCG TTCCGGGTGG CCGACCGTGA CATCGCGCTG
ACCGCGAGCG TCGGGGTGGC CTTCGCCGAG GACGACGTGT CCTCCGGAGA CCTGATCCGT
AACGCCGACG TGGCGATGGC CAGGGCCAAG GATCTCGGAG GGCGCCGGGT CGAGGTGTTC
GCCGCGCACA TGCACGCCGA CGTGGTGCGC CGGCTGGAAC TCGCCGCCGA CCTGCAGCGG
GCGCTGCTGG AGAACCAGTT CGCGATCGAG TACCAGCCGG TGGTGGACCT GGCCACCTCG
CGTGTCACCG CCGTGGAGGC GCTGGTGCGC TGGTGGCGGG GGAGCGCGTT CGTGCCGCCC
GAGCACTTCC TCGGCCCGGC GGAGGACACC GGCCTGATCG TCCCGCTGAG CGAGTGGATC
CTGCGCGAGG CCTGCCGGGA GGTCGCCGCC TGGCGCGCGT CCTCCTGGGA CATCGGGCTG
TCGCTCAACC TGTCGGCCCG GCAGATCATG GCGCCGCGTT TCGTGGAGAC CGTCGAGTCG
GCGCTGGCCG AGAGCGGCCT GCCGCCCAGC GCGCTGACCC TTGAGGTCAT CGAGGAGATG
CTGGTCGAGG ACGCCGACGA GACCATCACC CGGCTCTCGG AGCTGCGCAG GCTCGGGGTG
CGGCTGGCCA TCGACGACTT CGGCACCGGC TACGCCTCGC TGGCGTTCCT GCGGCAGCTC
CCGGTGGACA TGATCAAGAT TGACCCGTCG TTCGTGTCGG GGCTCGGCCG CGACGAGACG
CTGACGCTGC TGACCCGCAC GATCGTACGG CTCGGCCACG ATCTGGGGCT GATCGTGGTG
GCCGAGGGCA TCGAGCGTCC CGAGCAGCTT GAGCTGCTGC GCGAGATGGG CTGCACCCGG
GGTCAGGGCT TCCTGGTGGC GCGGCCGATG GCCGCCCGCG GGGTCGACTC CCTCATGCGC
ACCAGCCTCT CCAGCCTGCA CAGCGGTGTC TGA
 
Protein sequence
MGLVAALLSG VSPGTVGAVA GVVAAAIAAV SLFAGLLRGA DRRRATAVRW LAGGSVTWLV 
GVGARPLADG TPFAVSFADL VVLVGTAMLT VGTGLSATRP AHGRALLRDL ADSYMCAGSL
FVIGWVLLLG PSYRQADDAG TFAITIAPPL LCLILACAVG PAVLPIRRSA WPMGLAALAV
LAAITASETG TALARVSGDA PPLLGVWLAP AAFLLLAVVP WSGRTAPAAG PDDEEEEPSV
GQATSWLIAA LPLILVVAAT GVVLLRVLGG RVQGPVPVLA LVSTSIVCVL VVRLFVVLME
TGRMRRLVDL GERQLQDLAE STGDVVLLCD YDGVVREIGE GVEITYGYRP DELVGGTIFD
YIHPEDVPGI QVALRAMSLD EEPVEGPGTC MIACRVRASD GTWRPTESVA TRHVRGEDLL
LVTTRDVSDQ EALRNQVAHL TFHDGVTGLP NRAYFEERTR EVLARPGASS AVVVFLDLDG
FTAVNDSVGH ASGDYLLGQA ARRLRAAVRA DDTLARWGGD EFAVLLEAAV DAQTAVDLAE
RLVRTVSSEP FRVADRDIAL TASVGVAFAE DDVSSGDLIR NADVAMARAK DLGGRRVEVF
AAHMHADVVR RLELAADLQR ALLENQFAIE YQPVVDLATS RVTAVEALVR WWRGSAFVPP
EHFLGPAEDT GLIVPLSEWI LREACREVAA WRASSWDIGL SLNLSARQIM APRFVETVES
ALAESGLPPS ALTLEVIEEM LVEDADETIT RLSELRRLGV RLAIDDFGTG YASLAFLRQL
PVDMIKIDPS FVSGLGRDET LTLLTRTIVR LGHDLGLIVV AEGIERPEQL ELLREMGCTR
GQGFLVARPM AARGVDSLMR TSLSSLHSGV