Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8060 |
Symbol | |
ID | 8671388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 8875661 |
End bp | 8878273 |
Gene Length | 2613 bp |
Protein Length | 870 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein |
Protein accession | YP_003343458 |
Protein GI | 271969262 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGCTCG TTGCCGCCCT TCTCAGTGGT GTCTCGCCCG GGACCGTCGG AGCGGTGGCG GGTGTCGTCG CCGCCGCGAT CGCCGCGGTG TCACTGTTCG CCGGGCTTCT CCGGGGCGCC GACCGGCGCA GGGCGACGGC GGTCCGGTGG CTGGCCGGTG GCTCGGTCAC CTGGCTGGTC GGGGTCGGTG CGCGGCCGCT CGCGGACGGC ACGCCCTTCG CCGTGTCCTT CGCCGACCTG GTGGTCCTCG TCGGTACGGC GATGCTCACC GTCGGCACCG GGCTGTCCGC CACCCGGCCC GCGCACGGGC GTGCCCTGCT GCGGGATCTC GCCGACTCCT ACATGTGCGC CGGCTCGCTG TTCGTGATCG GCTGGGTCCT GCTGCTGGGC CCGTCCTACC GCCAGGCCGA CGACGCCGGC ACCTTCGCGA TCACCATCGC CCCGCCGCTG CTCTGCCTGA TCCTCGCGTG CGCCGTGGGC CCGGCGGTGC TGCCGATCCG GCGGTCCGCC TGGCCGATGG GCCTGGCGGC GCTGGCCGTG CTGGCCGCCA TCACGGCGTC CGAGACGGGC ACCGCGCTGG CCCGCGTGAG CGGCGACGCG CCGCCGCTGC TCGGGGTGTG GCTGGCTCCG GCGGCCTTCC TGCTGCTGGC CGTCGTCCCG TGGAGCGGCC GTACGGCGCC CGCCGCGGGC CCCGACGACG AGGAGGAGGA GCCGTCCGTC GGGCAGGCCA CCTCCTGGCT GATCGCGGCC CTGCCGCTGA TCCTCGTCGT GGCGGCCACC GGGGTCGTGC TCCTGCGCGT GCTCGGCGGC AGGGTGCAGG GGCCGGTCCC GGTCCTCGCC CTGGTGTCGA CGTCGATCGT CTGCGTCCTG GTGGTGCGCC TGTTCGTGGT GCTGATGGAG ACGGGCCGGA TGCGGCGCCT GGTGGATCTC GGCGAGCGGC AGCTCCAGGA CCTGGCGGAG AGCACCGGCG ACGTGGTCCT GCTGTGCGAC TACGACGGCG TGGTGCGGGA GATCGGCGAG GGCGTCGAGA TCACGTACGG CTACCGCCCC GACGAGCTGG TCGGCGGGAC GATCTTCGAC TACATCCACC CCGAGGACGT GCCCGGGATC CAGGTGGCGC TGCGCGCGAT GAGCCTGGAC GAGGAGCCGG TCGAGGGGCC GGGCACCTGC ATGATCGCCT GCCGGGTCCG GGCGTCCGAC GGCACCTGGC GGCCCACCGA GTCGGTGGCC ACCCGGCACG TGCGCGGCGA GGACCTGCTG CTGGTCACCA CCCGCGACGT CAGCGACCAG GAGGCCCTGC GCAACCAGGT CGCCCACCTG ACCTTCCACG ACGGCGTCAC CGGTCTGCCC AACCGGGCCT ACTTCGAGGA GCGCACCCGC GAGGTGCTGG CCCGTCCGGG CGCGAGCAGC GCCGTGGTGG TGTTCCTGGA TCTGGACGGC TTCACGGCGG TCAACGACTC GGTCGGCCAC GCCAGCGGCG ACTATCTGCT GGGCCAGGCC GCCCGCAGGC TCCGCGCCGC CGTACGGGCC GACGACACCC TGGCCCGCTG GGGCGGCGAC GAGTTCGCGG TGCTGCTGGA GGCGGCGGTG GACGCCCAGA CGGCGGTGGA TCTGGCCGAG CGGCTGGTCC GCACGGTCTC GTCCGAGCCG TTCCGGGTGG CCGACCGTGA CATCGCGCTG ACCGCGAGCG TCGGGGTGGC CTTCGCCGAG GACGACGTGT CCTCCGGAGA CCTGATCCGT AACGCCGACG TGGCGATGGC CAGGGCCAAG GATCTCGGAG GGCGCCGGGT CGAGGTGTTC GCCGCGCACA TGCACGCCGA CGTGGTGCGC CGGCTGGAAC TCGCCGCCGA CCTGCAGCGG GCGCTGCTGG AGAACCAGTT CGCGATCGAG TACCAGCCGG TGGTGGACCT GGCCACCTCG CGTGTCACCG CCGTGGAGGC GCTGGTGCGC TGGTGGCGGG GGAGCGCGTT CGTGCCGCCC GAGCACTTCC TCGGCCCGGC GGAGGACACC GGCCTGATCG TCCCGCTGAG CGAGTGGATC CTGCGCGAGG CCTGCCGGGA GGTCGCCGCC TGGCGCGCGT CCTCCTGGGA CATCGGGCTG TCGCTCAACC TGTCGGCCCG GCAGATCATG GCGCCGCGTT TCGTGGAGAC CGTCGAGTCG GCGCTGGCCG AGAGCGGCCT GCCGCCCAGC GCGCTGACCC TTGAGGTCAT CGAGGAGATG CTGGTCGAGG ACGCCGACGA GACCATCACC CGGCTCTCGG AGCTGCGCAG GCTCGGGGTG CGGCTGGCCA TCGACGACTT CGGCACCGGC TACGCCTCGC TGGCGTTCCT GCGGCAGCTC CCGGTGGACA TGATCAAGAT TGACCCGTCG TTCGTGTCGG GGCTCGGCCG CGACGAGACG CTGACGCTGC TGACCCGCAC GATCGTACGG CTCGGCCACG ATCTGGGGCT GATCGTGGTG GCCGAGGGCA TCGAGCGTCC CGAGCAGCTT GAGCTGCTGC GCGAGATGGG CTGCACCCGG GGTCAGGGCT TCCTGGTGGC GCGGCCGATG GCCGCCCGCG GGGTCGACTC CCTCATGCGC ACCAGCCTCT CCAGCCTGCA CAGCGGTGTC TGA
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Protein sequence | MGLVAALLSG VSPGTVGAVA GVVAAAIAAV SLFAGLLRGA DRRRATAVRW LAGGSVTWLV GVGARPLADG TPFAVSFADL VVLVGTAMLT VGTGLSATRP AHGRALLRDL ADSYMCAGSL FVIGWVLLLG PSYRQADDAG TFAITIAPPL LCLILACAVG PAVLPIRRSA WPMGLAALAV LAAITASETG TALARVSGDA PPLLGVWLAP AAFLLLAVVP WSGRTAPAAG PDDEEEEPSV GQATSWLIAA LPLILVVAAT GVVLLRVLGG RVQGPVPVLA LVSTSIVCVL VVRLFVVLME TGRMRRLVDL GERQLQDLAE STGDVVLLCD YDGVVREIGE GVEITYGYRP DELVGGTIFD YIHPEDVPGI QVALRAMSLD EEPVEGPGTC MIACRVRASD GTWRPTESVA TRHVRGEDLL LVTTRDVSDQ EALRNQVAHL TFHDGVTGLP NRAYFEERTR EVLARPGASS AVVVFLDLDG FTAVNDSVGH ASGDYLLGQA ARRLRAAVRA DDTLARWGGD EFAVLLEAAV DAQTAVDLAE RLVRTVSSEP FRVADRDIAL TASVGVAFAE DDVSSGDLIR NADVAMARAK DLGGRRVEVF AAHMHADVVR RLELAADLQR ALLENQFAIE YQPVVDLATS RVTAVEALVR WWRGSAFVPP EHFLGPAEDT GLIVPLSEWI LREACREVAA WRASSWDIGL SLNLSARQIM APRFVETVES ALAESGLPPS ALTLEVIEEM LVEDADETIT RLSELRRLGV RLAIDDFGTG YASLAFLRQL PVDMIKIDPS FVSGLGRDET LTLLTRTIVR LGHDLGLIVV AEGIERPEQL ELLREMGCTR GQGFLVARPM AARGVDSLMR TSLSSLHSGV
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