| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7421 |
|---|
| Symbol | |
|---|
| ID | 8670742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 8189097 |
|---|
| End bp | 8189924 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_003342847 |
|---|
| Protein GI | 271968651 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.720449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGAG AACGCCGCTA TCCCTCCGAC CTGACCGACG CGCAGTGGGC GCTGATCGAG
CCGCTGTTAC CCGGGCCGAA CTCGGGCGGA CGGCCGGAGA AGCACCCACG CCGCGACATC
GTCGACGCGA TCCTGTACGT GGTGCGTACC GGCTGCGCCT GGCGGCAACT CCCGTTCGAC
TTCCCGCCGT GGCAGACCGT GTACTGGTAC TTCGCCCGCT GGGAAGAAGC CAAGGTCACC
GACCAGATCA TGGCCGTCCT GCGGCGCCGG GTCCGGGCTG GGCAAGGCCG TGCCGAAGAA
CCCACCGCGG GCATCATCGC CTCCCAGAGC GTCAAAGGCG CCGACACCGT CGGCCGTGAC
AGCCGCGGCT ACGACGCGAG CAAGAAGATC AACGGCCGCA AGCGGTTCAT CGCGACCGAC
ACGCTCGGAT TACTGCTGGT CGTGTGTGTG ATGGCCGCCT CCGTCCAGGA CCACGACGGA
GCCAAGACCA CCTTGCTCGG CCTGTATCTG GTCACCCCGG TCCGGTACGT GTTCGCCGAC
GCCGGCTTCG CCGGGACCTT GGTCGGCTGG GTGCAGCGGA TCCTGCGCAC CGTGCTGCAC
ATCGTCCGCA AGACGCCGGG CCGGATCGGA TTCGCCGTGA TCGAACGACG CTGGGTCGTC
GAACGATCCC TGGCCTGGCT CACCAGCAAT CGCCGCCTTG CCCGCGACTA CGAGCGCCGG
CCCGCCATCG CCGAGGCCAT GATCCGTTGG GCCGCGATCA GCGGAATGAC CCGCCGACTT
ACCCGGGGCC GAGCCGCAGT CCGACAGCAG CGGTCCGTCC TCACCTGA
|
|---|
| Protein sequence | MPRERRYPSD LTDAQWALIE PLLPGPNSGG RPEKHPRRDI VDAILYVVRT GCAWRQLPFD
FPPWQTVYWY FARWEEAKVT DQIMAVLRRR VRAGQGRAEE PTAGIIASQS VKGADTVGRD
SRGYDASKKI NGRKRFIATD TLGLLLVVCV MAASVQDHDG AKTTLLGLYL VTPVRYVFAD
AGFAGTLVGW VQRILRTVLH IVRKTPGRIG FAVIERRWVV ERSLAWLTSN RRLARDYERR
PAIAEAMIRW AAISGMTRRL TRGRAAVRQQ RSVLT
|
|---|
| |