| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7116 |
|---|
| Symbol | |
|---|
| ID | 8670427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 7851558 |
|---|
| End bp | 7852109 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003342554 |
|---|
| Protein GI | 271968358 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.101346 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGAG CAGACGCCGC GCGCAACCGG GCGCGCATCC TGGAGGCGGC CGGGCAGCTG
TTCGCGGCCA AGGGCGCGCC GAACGTCACC ATGGACGACA TCGCCAAGGC GGCCGGGGTG
GGGCGGGGCA CGCTGTACCG CCGCTACCCC GACCGGGCCG CGATCGCGAC CGCGATGCTC
GACGAGCACG AGAAGGCGCT GCAGGAGAAG CTGATCGGCG GTGAGGCGCC CCTGGGCCCG
GGAGCGCCGC CCGCCGAGCG GCTGGCCGCC TTCTACGCGG CGATGGTGGA GCTGCTGGAG
GGCCACGCCC ACCTGGTGCT GGGCGCCGAG ACCGGGCACT CGCGGTTCGC CACCGGCGCC
TACGGTTTCT GGCGGCTGCA CGTGCGTTCG CTGCTGGTCT CCGCCGGAGT GCCCGACCCG
GACGCGCTGG TCGAGGTCGT GCTCGCCCCG CTGGCCCCCG AGGTCTACAC CCACCAGCGG
ACCGAGCGGG GGCTCAGCCC CGGGCGGGTC GCGGCGGCTC TGGGAGAGCT CGCCCACCGG
CTGCTCGGAT AG
|
|---|
| Protein sequence | MERADAARNR ARILEAAGQL FAAKGAPNVT MDDIAKAAGV GRGTLYRRYP DRAAIATAML
DEHEKALQEK LIGGEAPLGP GAPPAERLAA FYAAMVELLE GHAHLVLGAE TGHSRFATGA
YGFWRLHVRS LLVSAGVPDP DALVEVVLAP LAPEVYTHQR TERGLSPGRV AAALGELAHR
LLG
|
|---|
| |