Gene Sros_7102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7102 
Symbol 
ID8670413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7835741 
End bp7837294 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content73% 
IMG OID 
Productmajor facilitator superfamily transporter 
Protein accessionYP_003342542 
Protein GI271968346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0492657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTA TGGGGGCCGT GGCCGAGGCC ACGCGAGACG GAAGCGATCC GCGGGCGCGC 
GGGGCCGGCC GCTGGTCGGT CCTGATACTT CTCTGCTTCA GCCTCCTGTT GATCGCGGTG
GACGCCACCG TCCTGCACAT CGCGGTCCCG GCGCTGACCG CCGCGCTGGA ACCGAGCTCG
GTGCAACTGC TGTGGATCAT CGACGTCTAC TCGCTGGTGG TCGCACCGCT GCTGCTGACC
TTCGGCACCC TCGGCGACCG CTACGGGCGA AAACGCCTGG TGCTCGCCGG ATACCTGGTG
TTCGGCGCCG CCTCCGCGGC GGCGGCGTTC GCGCCGACCC CGCTCACGCT CATCACCGCG
CGGGCGTTCC TCGGTATCGG CGGCGCGATG ATCATGCCTG CCACGCTCTC CATCATCCGG
CAGGTCTTCA CCGACCGGCG GGAGCGCGCG ATCGCGCTGG GCGTGTGGAG CGCGGTGGCT
GCGGCCGGAG CCGCGATCGG ACCGCTCATC GGCGGCCTGC TCGTCGAGCA CTTCTGGTGG
GGCGCCGTCT TCCTGATCAA CGTGCCGATC CTGCTGGTGC TGCTGCCCTC GGCCGCCAGG
ATCCTGCCCG AGTCACGCCG GCGCGCCTCT CAGCCGTGGG ACGCGCCCAG CGCGCTGCTG
TCGGTGCTCG GCATCCTCGC GCTGGCCTTC GGCCTGAAGG AGGCGGGATC CGGCCATCCG
GGCGGGGTGG TGGCCTTCCT GTGCGGAGCC GGGCTGCTGG TCTGGTTCGT GCGCAGGCAG
CGGCGACTGC CCTTCCCCCT GCTCGACCTC GGCCTGTTCC GGCGGCGGGC GTTCTCCGTC
GGGGTGGCGG CGGTGCTGCT GACGGTCTTC GCGCTGGTCG GGCTGGAGCT GATGCTCGCC
CAGTATCTGC AGCTCGTGCT CGGTGACAGC CCGCTCGGGG CCGCGATCCG CATGCTGCCC
CTGATGATCG CCTCCGTCGC GGGAGGCCTC GCCGGCGCGC AGTTGCTGCG CCGGGTCGGA
CTGCGCGCCA CGATGAGCGG CGGGCTCGCG CTGACCACCC TGTCCCTGCT CCCCCCGCTG
GGCTGGGGGA CCGAGCCGCA TCCGCTGATG CTCGCGCTCT GCTTCGTCGG CATCGGCTTC
GGCATCCAGG TCACCCTGCT GGCCGCGTCC GACACGATCA TGTCCTCCGC CTCGGAGTCA
CGGGCGGGCG GCGCCGCCGC GATCGAGGAG ACCGCCTACG AGCTGGGAGC CGGCCTCGGG
GTGGCGATCC TCGGCACGAT CACCACCGTC GTCTACGCGC CCTCGCTGGC CTCGGTCTCC
GGCGTCTCCC CCGAGCTGAT GACCCTGGCC CGCCAGTCGC TCGCCGCCGC GGCGCACGCG
GCCCAGGAGA TCGGCGGCGC CGGTGGGATC GCGCTGCTGG GCGCAGCCCG GGTCGCCTTC
GTCTCCGGAC TGCACACCAC GATCATGGTG AGCGTGCTCC TGCTGGGCGC GACCGCGGTG
TCGGTGGCGC TCCTGGTCCC CCGCCGATCC GCTGACCAGG GCGACTGCGA CTGA
 
Protein sequence
MITMGAVAEA TRDGSDPRAR GAGRWSVLIL LCFSLLLIAV DATVLHIAVP ALTAALEPSS 
VQLLWIIDVY SLVVAPLLLT FGTLGDRYGR KRLVLAGYLV FGAASAAAAF APTPLTLITA
RAFLGIGGAM IMPATLSIIR QVFTDRRERA IALGVWSAVA AAGAAIGPLI GGLLVEHFWW
GAVFLINVPI LLVLLPSAAR ILPESRRRAS QPWDAPSALL SVLGILALAF GLKEAGSGHP
GGVVAFLCGA GLLVWFVRRQ RRLPFPLLDL GLFRRRAFSV GVAAVLLTVF ALVGLELMLA
QYLQLVLGDS PLGAAIRMLP LMIASVAGGL AGAQLLRRVG LRATMSGGLA LTTLSLLPPL
GWGTEPHPLM LALCFVGIGF GIQVTLLAAS DTIMSSASES RAGGAAAIEE TAYELGAGLG
VAILGTITTV VYAPSLASVS GVSPELMTLA RQSLAAAAHA AQEIGGAGGI ALLGAARVAF
VSGLHTTIMV SVLLLGATAV SVALLVPRRS ADQGDCD