Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_7047 |
Symbol | |
ID | 8670358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 7770649 |
End bp | 7772127 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | putative transmembrane efflux protein |
Protein accession | YP_003342489 |
Protein GI | 271968293 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0500177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGAGG ACGTCCGGTC CCGCGGGCCG GTTCAAGACT CGGCCGGTAC GGCGGCCGCG GCGGATCCGC GCCGCTGGCG CGCGCTGGCG GTGCTGGCGC TGGTGCAGTT CATGTTCACC GTGGACAGCT CCATCGTGAA CGTCGCGCTG CCGTCGGTGC AGCGGGAGCT GGGGGCGTCG ACGGCGGACC TGGCCTGGGT GGTCAACGCC TATGTCGTGA CCGCCGGCGG GCTGTTGCTG CTCGGCGGGC GGCTGGCCGA CCTGTGGGGG CGGCGCCGCA TGTTCCTCGT CGGCACGGCG GTGTTCGCGG TGGCGTCGCT GACCAGCGGC ATCGCCGCGA GCACCGGGAT GCTGGTGGCC AGCCGGTTCG GGCAGGGGCT CGGGGAGGCG CTGGCGGCGC CGGCCGCCCT GTCGATGATC GCGCTGATGT TCGCCGACAG CCGCGAGCGG GCCCGCGCCC TGGCGATCTG GGGAGGGCTG AGCGGGCTGG GCGCCACGGC CGGAGTGCTG CTGTCGGGGG CGCTGACCGA GCTGGCGGGC TGGCGCTGGG TCTTCTTCGT CAACCTGCCG GTCGCCGCGG TCGCGTTGCT GGTCACCCCC CGCCTGGTGG CGGCGCGGCC CGGTTCCGGC GGCCGGCGGG TGGACTGGGC GGGCGCGGTG CTCGTCACCG CCGGTCTGAT CGCGCTCATC GCCGGTCTGC TCGCGGCCGG CCACAACGGG TGGACCGCCC CGGCCGTCCT TGTCCCGCTG GGCGCGGGGC TGGCCGCACT GGCCGGTTTT GTCGCCGTGG AGACGAGGAC CGCCGAGCCG CTGGTGCCGC TGCGCTTCTT CGCCAGCCGC GTCCGCCTCT CGGCGAACCT GGCGACGATC ATGCTGACCA GCGGGATGGC GGCGACCATG TTCCTGCTCA CCCTCTACAT GCAGAACGTG CTCGGCTACC AGCCGCTGGC CACGGGCCTG GCCTACCTGC CCTTCTGCGT GGCCTTCCTT GGCGGCCTGA TGGCCTCGAC CGCGCTGACC GCCAGGCTGG GCACCACGGG CACCATCTGC GCCGGTCTTC TCCTCAGCGC CGTCGGGATG GCCTATCTGG CGCTCCGCAT GTCGGTCACC AGCGGTTACG CCGCCGACGT GCTGCCCGCC ACGGTGATGA TCGCCGCAGG GCTGGGGATC GCCTTCCCCA CGCTGCAGAA CGCCGCCCTG CACGGGGTGA CCGACGACGA CGCCGGGCTC GGCTCCGGGG TGCAGACGAC CATGCAGCAG CTGGGCAGCG CCCTCGGCCT GGCCGTCTTC GCCGCGATCG CGATAGGCCG CACCGGAGCG GCACTGGCCT CCGGGGACTC CGCCCCGGCG GCCGCCGTCA GCGGCTACCA GTGGGCCTTC TCCGTCGCCG CCGGGGTGCT GGTCCTCACC GCCCTGCTGA TGCCGGTGAC CGTCCGCTCC GTGCGGGAGA CCGGGGACGA GGCGCGCGCC GGCGGATGA
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Protein sequence | MDEDVRSRGP VQDSAGTAAA ADPRRWRALA VLALVQFMFT VDSSIVNVAL PSVQRELGAS TADLAWVVNA YVVTAGGLLL LGGRLADLWG RRRMFLVGTA VFAVASLTSG IAASTGMLVA SRFGQGLGEA LAAPAALSMI ALMFADSRER ARALAIWGGL SGLGATAGVL LSGALTELAG WRWVFFVNLP VAAVALLVTP RLVAARPGSG GRRVDWAGAV LVTAGLIALI AGLLAAGHNG WTAPAVLVPL GAGLAALAGF VAVETRTAEP LVPLRFFASR VRLSANLATI MLTSGMAATM FLLTLYMQNV LGYQPLATGL AYLPFCVAFL GGLMASTALT ARLGTTGTIC AGLLLSAVGM AYLALRMSVT SGYAADVLPA TVMIAAGLGI AFPTLQNAAL HGVTDDDAGL GSGVQTTMQQ LGSALGLAVF AAIAIGRTGA ALASGDSAPA AAVSGYQWAF SVAAGVLVLT ALLMPVTVRS VRETGDEARA GG
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