| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6992 |
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| Symbol | |
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| ID | 8670302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | - |
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| Start bp | 7709498 |
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| End bp | 7711153 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | Choline dehydrogenase and related flavoprotein- like protein |
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| Protein accession | YP_003342435 |
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| Protein GI | 271968239 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.175561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0479417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA CCGAACGCAC CGACGTCCTC GTGGTCGGAA GCGGCTTCGG CGGCGCGATC
GCGGCCTACC ACCTTGCCGC CGGCGGCGCG CGGGTCGTGG TGCTCGAACG CGGGCCCTGG
CTGACGGGAA ACGACTTCGA CCACGACTTC AAGCTCGGAT CGTCCTACAC GCGGGCCTTC
GACTTCACCG TGGGCGACGG CATGAGCGTG CTCGGCGGCA ACTGCGTGGG CGGCGGCAGC
GTCGTCTACT TCGCCGCGAT GCCCCGCGCG CCGCGCTTCG TCTTCGAACG CCACGGCAGC
ATCGGCAGGC GGATGTGGCC CTCGGCCGTC AGTCGCGACA CCCTTGAGCC GTGGTACGAC
CGGGTGGAGG AGTCGATCCC GGTCACCAAG CAGGAGTGGA GCGACGTCAG CTACGCCGGA
GGGCTGTGGG CCGCCGCGTG CAACCACGCG GGCCGTACGG CCAACCCCCT CCCGAGCGCC
ATCGACAACA GCAAGTGCGC CAACTGCAAC TGGATGATGG CCGGCTGCCG CTTCGACGCC
AAGCGGTCCC TGCTGTTCAA CTACCTGCCG GCCGCGCTCG CGCACGGCGC GGAGGTCCGG
CCGCTGCACG AGGTGCAGCA CATCTCGCGG ACCGACGACG GCGACTACCG GGTGCACTAC
AACGTCGTCG ACGACGAGGA CTACCGGATC CAGGCGGGCA GCGGCACGAT CGACGCCAAG
ATCATCGTTC TCGCGGCCGG CGCCGGCGCC ACCCCCGTCA TCCTGCAGCG CAGCGAGGCG
ACGCTCGGCA CGATGCCGAA CGCCGTGGGC AGATACTTCT CGGGCAACGG CGAGCGGCTC
AACACCGCCG TCTTCAACGA GGACAAGGTG CGTGAGGTTC TCGGCCTGAG CCGGGGGGAC
GGCCTGGCCT ACGAGGCCAA CCAGATCGGC AAGGGGCCGA CCGTGGCCAG CTGGGACCGT
CTCGACGGCT CGCTGCCGGA GTACTCCCGC TTCTCGCTGG AGCAGCTCTA CTTCCCGCCC
GGCCTCGGCA CCATCCTCGC CCAGGTGCCC GGCGCGACCG GCCCGAGCTG GTTCGGCGTG
GACAAGAAGG AGCTCCTCAA GCGCTGGCGC TCCTGGCTGA TCATCTTCCA GATGACCGAG
GACGACAACG AGGGGGTGTT CGGCCCGCCC CCCGCCACCG GCAACGCCGA CCGGATCTCG
CAGCAGATGC TCGGAGTCGG CAGGCTCCGG TACAACCCGA CCGCCAACAC GCTGCGCGGC
TGGGCCGAGG CGGACGCCGA GGTGAAGGAC ATCCTGGAAC GCGACGGGCT GGCCGAGGTG
GCGGCGTGGA CCAACGACGT GGTCGGCGCC TACACCGTGC ACCCGCTGGC CTCCTGCCGT
ATCGGCGACG ATCCGGACAC CTCCGCGCTC GACGACCGTA ACGAGCTGCG CGGACACCCC
GGAATCTTCG TCACCGACGG CTCCGCCGTA CCGGGGGCGC TCACCGTCAA CCCGGCGATG
ACCATCGCCG CGCTCGCCGA GCGCGCCGTC CCCGGCATCG TGCAGGCGGC ACAGCAGCGG
GGCGTGAACG TCACGTACGG CGCGCCGTCG CCGGACGGAG CCATCAGCGG GCGGCAGGGA
GCGGCCCGGC TGGTGCCCAC CCTGCTGCAC AGGTAG
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| Protein sequence | MTSTERTDVL VVGSGFGGAI AAYHLAAGGA RVVVLERGPW LTGNDFDHDF KLGSSYTRAF
DFTVGDGMSV LGGNCVGGGS VVYFAAMPRA PRFVFERHGS IGRRMWPSAV SRDTLEPWYD
RVEESIPVTK QEWSDVSYAG GLWAAACNHA GRTANPLPSA IDNSKCANCN WMMAGCRFDA
KRSLLFNYLP AALAHGAEVR PLHEVQHISR TDDGDYRVHY NVVDDEDYRI QAGSGTIDAK
IIVLAAGAGA TPVILQRSEA TLGTMPNAVG RYFSGNGERL NTAVFNEDKV REVLGLSRGD
GLAYEANQIG KGPTVASWDR LDGSLPEYSR FSLEQLYFPP GLGTILAQVP GATGPSWFGV
DKKELLKRWR SWLIIFQMTE DDNEGVFGPP PATGNADRIS QQMLGVGRLR YNPTANTLRG
WAEADAEVKD ILERDGLAEV AAWTNDVVGA YTVHPLASCR IGDDPDTSAL DDRNELRGHP
GIFVTDGSAV PGALTVNPAM TIAALAERAV PGIVQAAQQR GVNVTYGAPS PDGAISGRQG
AARLVPTLLH R
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