Gene Sros_6820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6820 
Symbol 
ID8670130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7507044 
End bp7508282 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content75% 
IMG OID 
Productpeptidase M20 
Protein accessionYP_003342270 
Protein GI271968074 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.547293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0081642 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACCTCC GCCTGATGCT TGAGGACCTG GAGGAGCTCG TCTCGTGCGA GTCGTTCTCC 
GCCGACCACG AGGCGGTGGC CCGCAGCGCC CGGGTGGTCG CCGACCAGGG GCTGCGCAGG
CTCGGCACGC GCCCCGAGAC GATCGTGATC GACGGGGTCA CCCACCTGCG GTGGACCTTC
GGCACGCCCC GGGTCCTGCT GGTCGGCCAC CACGACACCG TCTGGCCGAT CGGGACGCTC
GCCGAACATC CCTGGTCGCT GGTGGACGGG ATCGCCCGCG GGCCCGGGGT GTTCGACATG
AAGGCCGGGC TGGTGCAGGC CTTCCACGCG CTGGCCGCGC TGCCGTCGCC GGAAGGGGTG
TGCCTGCTGG TCACCGGGGA CGAGGAGGTC GGCTCACCGT CCTCGCGCGC GCTGATCGAG
GAGTCGGCGC GCGGCTGCGC GGCCGCGTTC GTGCTGGAGG CCGGCGCCGA CGGCGGCGCG
CTCAAGACCG CGCGCAAGGG CACCTCCAAC TACGCGGTCA CCGTGCACGG CAGGGCCGCG
CACGCGGGCC TGGAGCCCGA GAGGGGTGCC AACGCCGGGA TCGAGCTGGC CCACCAGATC
CTCGCGCTCG GCGCGATCGC CCTGTCGGCG GACGACGGGG CGGCACCGGA CGGTCTGGGC
CCGACCACGG TCACCCCGAC CGTGCTGTCC GGGGGCACCA CGACCAACAC CGTGCCCGCG
CTCGCCAGCG TGGAGGTGGA TGTGCGGGTG CCCACCCTCG CCGCGCAGGC GCGGGTGGAC
GAGATGGTAC GGGCGCTCGC CCCCCGGACC CCGGGGACCC GGCTGGAGGT GAGCGGCGGG
CCGAACCGCC CTCCCCTGGA GCAGGCCTCG TCGGCGCGCC TGTTCGAACT GGCCTGCCGG
ATCGCCAAGG ATCTGGGTAT GGAACCGCCG CGTGGGGTGG CCGTGGGCGG CGCGTCCGAC
GGCAACTTCA CCGCGGGGAT CGGCTGCCCG ACCCTCGACG GGCTCGGCGC GGTGGGCGGC
GGCGCCCATG CCGCACACGA GCACGTGGTC GTCGAGGAGA TGCCCGGCCG GACGAGGCTG
CTGACCGGGC TGATCGCCTC GGTCCTCGGA GGGGAGCCCC CTGCGGGAGC GGTGGCCACG
GAAGCGGCGG TCACGGGAGA GGCGGCCGCG GGAAGGACCT CGCCGGCGGC GGGGAGTTCG
GCGACCGCGG GAGAGTCCCC GGGGGAGGCC GGCAGGTGA
 
Protein sequence
MNLRLMLEDL EELVSCESFS ADHEAVARSA RVVADQGLRR LGTRPETIVI DGVTHLRWTF 
GTPRVLLVGH HDTVWPIGTL AEHPWSLVDG IARGPGVFDM KAGLVQAFHA LAALPSPEGV
CLLVTGDEEV GSPSSRALIE ESARGCAAAF VLEAGADGGA LKTARKGTSN YAVTVHGRAA
HAGLEPERGA NAGIELAHQI LALGAIALSA DDGAAPDGLG PTTVTPTVLS GGTTTNTVPA
LASVEVDVRV PTLAAQARVD EMVRALAPRT PGTRLEVSGG PNRPPLEQAS SARLFELACR
IAKDLGMEPP RGVAVGGASD GNFTAGIGCP TLDGLGAVGG GAHAAHEHVV VEEMPGRTRL
LTGLIASVLG GEPPAGAVAT EAAVTGEAAA GRTSPAAGSS ATAGESPGEA GR