Gene Sros_6732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6732 
Symbol 
ID8670041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7408399 
End bp7409868 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content68% 
IMG OID 
Productamino acid transporter 
Protein accessionYP_003342184 
Protein GI271967988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.156437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.210596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGTTT TTCGCGTCAA ATCGATAGAG CAGTCGATCC AGGACACCGA GGAGCCCGAG 
CATCGGCTGC GCAAGGATCT CTCCGCGCTC GACCTGACCG TCTTCGGCAT CGGCGTCATC
GTGGGCACCG GCATCTTCGT GCTCACCGGC CGGGTCGCCA GGGACCTGGC CGGACCCGCG
GTCGCCCTGT CGTTCGTGGC CGCCGGGATC GTCTGCGCGC TGGCCGCGCT CTGCTACGCC
GAGTTCGCAT CCACGGTGCC GGTGGCGGGA TCGGCCTACA CCTTCGCCTT CGCCACGCTC
GGTGAGTTCC CCGCCTGGAT CATCGGCTGG GACCTGATGC TGGAGATGAT GCTCGGCGCC
GCGGTCGTGG CGGTCGGCTG GTCGGGCTAC CTGACCTCGC TGCTGGAGTC TCTGGGGATC
GTCCTGCCCG ACGCGATAGC GGGGGAGGGG GCCACCTTCA ACCTGCCCGC TGCGCTGGTC
GTGCTGGCCC TCACCGCCAT CCTGGTCGCC GGGATCAAGC TCTCCTCCCG GTTCAACCTG
ATCATCGTCA CGATCAAGAT CGCGGTGGTC CTGCTCGTCA TCGTGGCGGG GCTGTTCTTC
ATCAACATGG CCAACTACAC CCCCTTCATC CCGCCCTCCA AGCCCACCCC CGCCGTCGAG
GGCCTGGCCG CGCCGCTGAT CCAGGTGCTG TTCGGGATCA CCCCCGTCGC CTTCGGCGTG
CTGGGCATCT TCAGCGCCGC GGCGATCGTG TTCTTCGCCT ACATCGGCTT CGACGTGGTC
GCCACCGCGG CGGAGGAGAC CCGCGACCCG CGCCGTGACC TGCCGATCGG CATCATCGCC
TCGCTGGTCA TCTGCACCCT CCTCTACGTC GCGGTCTCCC TGGTCGTCGT CGGCATGCAG
CCCTACTCGC AGCTCAGCGA GTCCGCGCCG CTGGCGGACG CGTTCAAGGC GGTCGGCCAG
ACCTGGGCGG CGACGCTCAT CAGCATCGGC GCCCTGGCCG GGCTCACCAC CGTCGTGATG
ATCCTCATGC TCGGCATGTC GCGGGTGATG TTCGCGATGT CGCGCGACAA CCTGCTGCCG
CGCGGACTGT CCAAGGTCCA CCCGAGGTTC GGCACGCCGT ACCGGATCAC CATCCTGATG
GGCGTCATCG TCGCGGTCCT GGCGGGGCTG GTGCCGCTGT CGACGATCGC CGAGCTGGTC
AACATCGGCA CGCTCTTCGC ATTCGTGATC GTCTCGATCG CGGTGGTCAT CCTCCGGCGC
ACCCGCCCCG ACCTTCCGCG CTCCTTCCGC ACCCCGCTGG TCCCGCTGGT GCCGATCCTG
TCGGTGCTGG CCTGCCTCTA CCTGATGCTC AACCTCCCGG TGGAGACCTG GCTCAGGTTC
GTCGTGTGGA TGATCATCGG CGTCGTCGTC TATGTCACGT ACGGCTACCG CCACAGCCGG
GTGACACGGC GGCCGCTGGA CAGCCGGTAG
 
Protein sequence
MEVFRVKSIE QSIQDTEEPE HRLRKDLSAL DLTVFGIGVI VGTGIFVLTG RVARDLAGPA 
VALSFVAAGI VCALAALCYA EFASTVPVAG SAYTFAFATL GEFPAWIIGW DLMLEMMLGA
AVVAVGWSGY LTSLLESLGI VLPDAIAGEG ATFNLPAALV VLALTAILVA GIKLSSRFNL
IIVTIKIAVV LLVIVAGLFF INMANYTPFI PPSKPTPAVE GLAAPLIQVL FGITPVAFGV
LGIFSAAAIV FFAYIGFDVV ATAAEETRDP RRDLPIGIIA SLVICTLLYV AVSLVVVGMQ
PYSQLSESAP LADAFKAVGQ TWAATLISIG ALAGLTTVVM ILMLGMSRVM FAMSRDNLLP
RGLSKVHPRF GTPYRITILM GVIVAVLAGL VPLSTIAELV NIGTLFAFVI VSIAVVILRR
TRPDLPRSFR TPLVPLVPIL SVLACLYLML NLPVETWLRF VVWMIIGVVV YVTYGYRHSR
VTRRPLDSR