Gene Sros_6568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6568 
Symbol 
ID8669877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7229718 
End bp7230215 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003342024 
Protein GI271967828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0197129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00578077 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGACGAA AGTTCAGGAT CCTGGCGCCC ATGACGGCGG TCGCGCTCGG CTGCGCGATG 
CTCGTCTCCG GCCCGGCGAG CGCCTCGGCG ACCGCTGCCA CGGGACCCAT CCGCACCCAC
CACAACTGGC GCTGCCTCGA CGCCGACCTC AACACCATCG GGCCGAACGG CACGAAGGTG
CAGCTGTGGA ACTGCAACGG CTGGCCCAAC CAGGCGTGGA CCTACGACGT GCGCAGCCAC
ACGATCCGCA GCAAGAGGAA CGGCCGCTGT CTCGACGCCG ATCTCAACAC CATCGGGCCG
AACGGCACGA AGGTGCAGCT GTGGGACTGC AACGGCTGGT CCAACCAGAA GTGGATCTAC
GATGCGGTCA GCCACACGAT CTACAGCATG CACAACGGCC GCTGTCTCGA CGCCGATCTC
AACACCATCG GGTCGAACGG CACGAAGGTG CAGCTGTGGG ACTGCAACGG CTGGTCCAAC
CAGAAGTGGA GCCTCTGA
 
Protein sequence
MRRKFRILAP MTAVALGCAM LVSGPASASA TAATGPIRTH HNWRCLDADL NTIGPNGTKV 
QLWNCNGWPN QAWTYDVRSH TIRSKRNGRC LDADLNTIGP NGTKVQLWDC NGWSNQKWIY
DAVSHTIYSM HNGRCLDADL NTIGSNGTKV QLWDCNGWSN QKWSL