| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6564 |
|---|
| Symbol | |
|---|
| ID | 8669873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 7225463 |
|---|
| End bp | 7227043 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_003342020 |
|---|
| Protein GI | 271967824 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.569718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0165949 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACCG AACAACAGGC CCAGGCCGAG GCCGCACCGC GCTTCACGCA CAAGCAGGTG
CTGGAGATCT TGGCCGGACT GATGCTCGCC ATGCTGACGT CGATGATCGC GACGTCCGTG
GTGGGAACCG CGCTGCCGAC GATCGTGGGC ACGCTCGGCG GTCAGGACCA GCTGGCCTGG
GTGGCCAGCG CGACCCTGCT CACCATGACG GCCTCCACCC CGCTCTGGGG CAAGCTGTCG
GACCTCTACG GCCGCAAGTT CATGTTCCAG GTCTCCCTGG TCGTCTTCGC GGTCTCCTCC
ATCGCCGCGG GCTTCTCCCA GGACATGGGC CAGCTCATCG CGGCCCGGGC CGTGCAGGGC
ATCGGCGCCG GCGGACTCGC CGCGCTGCCG CAGATCATCC TGGGCGACGT GGTCGAGCCC
CGCGAGCGTG GCCGCTACTC CGGCTACATG GGTGCGGTCT TCGGCGTCTC CACCGTCGCC
GGCCCGCTGC TGGGCGGATT CATCGTCGAC AACATGTCCT GGCGCTGGAC GTTCTGGATC
TGCGTGCCGC TGGCCGTGGT CGCGTTCGTC GTCATCCAGA AGGTGCTCAA GCTGCCGCTC
GTCCGCCACG ACACCAAGGT CGACTGGTGG GGCGCCACCT TCATCACCGG CGGAACCACC
GCGCTGATGC TGCTGCTGTC CCTGGGCGGC AAGGAGTTCG ACTGGAACTC CGCGTGGACC
TACGGCCTGG GCGCGCTCAG CCTGGTGATG TTCGGCCTCG CCGTCGTCGC CGAACGCCGG
GCCGCCGACC CCATCCTGCC TCCGCGGCTG TTCCGCAACC ACACCTTCGT GCTCACCAGC
GTCGCATCCC TGCTGGTCGG CGCGGCGATG TTCGGCGCGC TGATGTTCCT CCCGCAGTAC
CTGCAGATCG TCAAGGGCAT GAGCCCCACC GGCTCCGGCC TGATGACCCT GCCCATGGTG
CTCGGCCTGC TCGTCTCCTC GATCCTGGTC GGCCGCTTCG TCAGCCAGAC CGGCCGGTGG
AAGATCTTCC CCGTCGCAGG CATGCTGCTG GTCGCGCTCG GCCTGTTCCT GCTCTCCCGG
CTGCACGTCG ACAGCTCGCT GGTGGTCGTC GGCCTCGACA TCGCGGTGCT GGGCATCGGC
CTCGGCGCCT CCATGCAGAT CCTGATCCTG GCCGCGCAGA ACGCCGTGAC CCGCGCCGAC
CTGGCCTCCA CCACCTCGGG TGTGGCCTTC TTCCGCTCCC TGGGCGGCGC GGTCGGCGTG
GCGGCCTTCG GCGCCATCCT GTCCAACCGG CTCAGCGCGG AGCTGATCTC CCTGGCCAAG
GCCGCCCACC TGCCCCTCAC CGGCGGCGCG ACCCCCAGCC TCGGCTCCCC CGACGCCATC
CGCCACCTGC CCGCCCCGGT GCTGGAGGTG GTCCTGGAGG CCTTCACCCG GGCCATCCAC
ATGGTCTTCC TGGTGGGCGT GCCCATCGCC GTCCTGGCCG CGGTGGCCAC CCTGATGCTG
AAGGAGATCC CGCTCCGCTC GGCCCAGACC ACCCCCGCCA CCCCCGCCGA CCCGACCGCT
CCCCCGGTCC GGGCCGAATA G
|
|---|
| Protein sequence | MLTEQQAQAE AAPRFTHKQV LEILAGLMLA MLTSMIATSV VGTALPTIVG TLGGQDQLAW
VASATLLTMT ASTPLWGKLS DLYGRKFMFQ VSLVVFAVSS IAAGFSQDMG QLIAARAVQG
IGAGGLAALP QIILGDVVEP RERGRYSGYM GAVFGVSTVA GPLLGGFIVD NMSWRWTFWI
CVPLAVVAFV VIQKVLKLPL VRHDTKVDWW GATFITGGTT ALMLLLSLGG KEFDWNSAWT
YGLGALSLVM FGLAVVAERR AADPILPPRL FRNHTFVLTS VASLLVGAAM FGALMFLPQY
LQIVKGMSPT GSGLMTLPMV LGLLVSSILV GRFVSQTGRW KIFPVAGMLL VALGLFLLSR
LHVDSSLVVV GLDIAVLGIG LGASMQILIL AAQNAVTRAD LASTTSGVAF FRSLGGAVGV
AAFGAILSNR LSAELISLAK AAHLPLTGGA TPSLGSPDAI RHLPAPVLEV VLEAFTRAIH
MVFLVGVPIA VLAAVATLML KEIPLRSAQT TPATPADPTA PPVRAE
|
|---|
| |