Gene Sros_6481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6481 
Symbol 
ID8669790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7103991 
End bp7104866 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content69% 
IMG OID 
Productputative transcriptional regulator, XRE family 
Protein accessionYP_003341938 
Protein GI271967742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.787196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.247273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCC GACGCAGTCC CACGGCCCGC CATCGCCGTC TGATCACGGA ACTGAACCGC 
CTTCGGGAGA GCAGCGGGCT GTCACGGGCG GAGGTGGCCG AGCGGATCGG CTCCACCGAC
ACCACCGTCT GGAGATACGA GACGGGGCTC ACCCGTCCCA AACCCTCCGA CGTGGCGGCC
CTCACCGATG TGTACGGCGT GACCGGAGAG GCCCGGGACT CCCTGATCCA GATGGCCAGG
GACGCCCGCA AGCGAGGCTG GTGGCACCGG CACCGGCAGG CCCTCAAACC CGGCTTCGAC
TCCTACATCG GGCTGGAGGC GGAGGCGTCG GTGGTGCGCT CGTACGAACC GCTGGTCGTC
CCCGGCCTGA TGCAGACCGA GCCGTACGCA CGTGCCGTCA TCGAGGCGAC CGCCCTCACC
CACGCCCCCT CAGCGGTCGA TGAGAAGGTC TCCGTGCGCG TCTCGCGCCA GCAGTTGCTG
CACGGCCCCG GTGACCCGAT CCAACTCGTC GCGGTGCTCG ACGAGGCAGT GCTCCGGCGT
CAGGTCGGCG GCCCGGGGGT GATGCGCGAG CAGCTGGAAC ACCTGCTCGA TCTCGGCAGG
CTGCCCAATG TGGAGATCCG GGTGATCCCG TTCTCCGCTG GGGCGCACGC CGCGATGGAC
GGCAAGTTCT GCCTGCTCAG CTTCCCCGAG CCCGGCGATC CCGACCTCGT CTACCTGGAA
CAGGCGGCGA GCGGGCTCGT GCCGGAGGAC CCGGAGGAGG TGCGCCGCTA CACCCTCATG
TTCGGGAGCC TGTCGGCACT GGCTCTCGGC GCGGAGGCGT CGGCCACCTT CATCGCCCAG
ATGGCGAAGA GATGTTCCAA CCAACCACAG GAATGA
 
Protein sequence
MASRRSPTAR HRRLITELNR LRESSGLSRA EVAERIGSTD TTVWRYETGL TRPKPSDVAA 
LTDVYGVTGE ARDSLIQMAR DARKRGWWHR HRQALKPGFD SYIGLEAEAS VVRSYEPLVV
PGLMQTEPYA RAVIEATALT HAPSAVDEKV SVRVSRQQLL HGPGDPIQLV AVLDEAVLRR
QVGGPGVMRE QLEHLLDLGR LPNVEIRVIP FSAGAHAAMD GKFCLLSFPE PGDPDLVYLE
QAASGLVPED PEEVRRYTLM FGSLSALALG AEASATFIAQ MAKRCSNQPQ E