Gene Sros_6464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6464 
Symbol 
ID8669773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7082958 
End bp7083695 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003341921 
Protein GI271967725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0682753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TCCCGGCTCC GCCGTGGCGC AGGACCCGCA GGGCGAACGC TCCCCGGACC 
GTCCTGAGCA GGGACCTCAT CGTCGCCGCC GGCCTGCGGA TCCTCGACGC CGAAGGGCTT
GACGCGGTGA GCATGCGCCG GGTCGCCCAG GAGCTCGGCA CCGGCCCCGC CTCCCTCTAC
GCCCACGTGG AGAACAAGGA GGAGCTGCTC GACCTGATCT ACGACGAGGT CATGAGCGAG
ATCCAGGTGC CCGAGCCCGA GCCGGAGCGC TGGCTGGAGC AGCTCAGAGA GCTGATCATG
GAGGCGTCCC GGGTGTTCCG GGCCCACGCC GACATCGCCA AGGTCGGGCT GGCCACCATC
CCGACCGGGC CCAACGCGCT GCGGATGGCC GACGCCCAGC TGGCCGTCAT GCTCGCCGGA
GGGGTGCCGC CCAAGGTCGC GGCCCTGATG ATCGACCGCC TCGGCCTCTA CGTCTGCTCC
GACGCCTACG AGGGCTCCCT CTACCTCAAC AGGCAGCGCG CCAGCGGCAG GGACCTGGAG
AGCTTCCTGG GGGAGTTCTT CGGGCAGATC GAGGAGTTCT ACCGCAGCCT GCCCGCCGAT
CGCTTCCCCC ACCTCGTCGC CCAGATCGAC AACCTGATGG AGGCCGGCGG CGCCGAGCGG
TTCGAGTTCG GCCTGGATCT GCTCCTGCGC GGCCTGGCCT CCCACGTCGA GGCGGCGGGT
CCTACGACCA AGGGCTGA
 
Protein sequence
MTDIPAPPWR RTRRANAPRT VLSRDLIVAA GLRILDAEGL DAVSMRRVAQ ELGTGPASLY 
AHVENKEELL DLIYDEVMSE IQVPEPEPER WLEQLRELIM EASRVFRAHA DIAKVGLATI
PTGPNALRMA DAQLAVMLAG GVPPKVAALM IDRLGLYVCS DAYEGSLYLN RQRASGRDLE
SFLGEFFGQI EEFYRSLPAD RFPHLVAQID NLMEAGGAER FEFGLDLLLR GLASHVEAAG
PTTKG