Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6451 |
Symbol | |
ID | 8669760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 7065752 |
End bp | 7069627 |
Gene Length | 3876 bp |
Protein Length | 1291 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | exonuclease SbcC |
Protein accession | YP_003341908 |
Protein GI | 271967712 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0663249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0228854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCGC ACCGTCTGTG GATCAGCGCG TTCGGCTCCT TCCCCGCCGA GGAGGAGGTC GACTTCGACG CCCTGGCCGA GGCCGGGCTG TTCCTCATCC ACGGCCCCAC CGGCGCGGGC AAGACCACCG TGCTGGACGC GCTCTGCTAC GCCCTGTACG GCAGGGTGCC GGGCAAGCGC GACAGCGCCA AGAGCCTGCG CTGCGACCAC GCGCCCCCGG GCCGGGGGCC CAGCGTGGCG CTGGAGGTCA CGATCAGGGG CCGGCGGCTG AAGATCACTC GATCGCCGGC CTGGCAGCGC CCTAAGCTCA GGGGCACCGG CACCACGAGG GAGAACGAGA AGGCCCTGCT GCAGGAGCTC ACGCCTTCGG GGGAGTGGAC CGGGCTGACC ACGCGGGTCG ACGAGGCCGG AGAGCTCATC GGCACCCTGC TGGGCATGAA CGCCGAGCAG TTCTTCCAGG TCGCGATGTT GCCCCAGGGG GATTTCGCGA AGTTCCTGCG CGCCGACGGC GAGGACCGCC GCAGGGTCCT CGAACGGCTC TTCTCCGTGA GGATCTACGC CGCCGCCGAG TCCTGGCTCG CCGACCGGCG GACCGAGGCC CACCGCGAGC AGCAGGCCCT CCGCAAGGAG GTGGACTTCG CGGTCAAGCG CCTGGAGGAG GCCGCGGGCC CCGGCCTCCT CGCGTCGCTG GCAGGGGCCG CCTCCCCGCA GCCCCCCGGT TCCGCGGAGG CCGGAGCGGC CGGGCTGTTC GAGCTCCCCG AGGGCGACGC CGGGCCGTCC GCGGTGGCGG TCTCCGCGGA GGACGATCCG CTGGAGTGGG CCCGGACGCT GGAGGAGCTG GCCGCCGAGG AGGTCGCCGG GATGAGCCGG GGCCACGGCG AGGGCGAGGA GGCGGTACGG CAGGCACGCG CGAGGCTGGC GCACGGCGTC GCGCTGGCCG AGAGGCGGCG CCGTCACGCC GAGGCGCTGA CGCGGAGCCG GGCGCTGGAG GAGAGCGCCG AGGAGCGGGC GGATCTGGAG ACCATCCTGG CGGAGGCGGC CCGCGCCGAC CGGGTGCTGC CCCTGATCCA GGCCGCCGAG CAGCGGGCCG AGGCGGCGGC CAAGGCCCAC CGGCTGGCCG CCGACGCCGT CGCCCGTGCC CTCCCCCTCC TCCGTGACGG CCGCGACACC ACCCCGGACC GTCTGGCCAC GCTGGAGCGC GACCGGCACC GCGAGATCAC CCGGCTGGGC GAGCTGCGCG CCGAGGAGTC ACGCCTGGCG AAGATCCTCC AGGACCGGGA GGAGTCCGGC CGTGAGATCA CCGGGCTGAC CGCCGCGCAG GCCGGGACCG ACGCCCGCCT GGCGGTCCTT CCCGGGCTCC GCCGCGACGT GGACGCCCGC CTCACGGCCG CCCGCCTGGA CGCCGCCCGC ATCCCGGCCG CCGAGTCCGC CGGGGAGGGC GCGGCCGCCC GCCTGCGGGC CGCCGAGCAC CGCGACGGCC TCGCCGCCGC GCTGGCCGCC GCCCGCCACG ACCTGGCTGC CAGGCTCCGC GCCCTGCCTG CCCTCGCGGA CGGCGCCGGC GTGCCCGCCG TCCGCGAGGG GGCCGAGGTC CGCGAGCTGC TGGCCTCCTG GGAGCGCGAG CGCAGGGAGG AGAGCGCCGG GCTGGAGGGG TTGCGCGCCG ACGAGGCCCG GCTCGCCGAG CTGGCCGGGC TGCTCGCCGC GCTCGACGTC GAGCTGCGGG AGGCGGCCGG GCAGGAGTCC GCGCTCCGCG AGGCCCAGGA GGCGCTGCCC GCCGCACTGG CGGACGCCTC GGCGCGCCTG GCGGCGGTCA GAGCGCAGGC GGCCGGGATC CCCGCCGCCC AGGCGGCCGC CGACGCCGCC GCCGCCGGGC TCGACGCCGC CCGGCGGCGT GACGCCCTCC GCGTCGAGCT GGAGTCCGCG CGCGCGGCCC AGACCGAGGC CACCGACCAC GCCCAGCGTC TCCGCGACCG CCACCTGGAC CTCCGCCAGG CCAGGATCGA CGGCATGGCC GCCGAGCTCG CCCTCAAGCT CGCCCCGGGC GAGCCCTGCG CGGTCTGCGG CTCACCCGAC CACCCGGCCC CCGCCGCCCC CGCCGACGCG GCGCCCACCG CCGAGGACGA ACGCGCCGCC CAGAGCGCCT ACGACACCGC CACGGACCGG CGCCGGACCG CCGAGAGCGC CGTCGCGGCC CTGGCCTCGC GGCTGGAGGA GGCGCTCGCC GTCGCGGGCG AGCTGGGCGC CGACCACGCG CGGGAGGCTC TCGCCGAGGC CGGACGGGAG CTGGCGGCCC TGACCGCCGC CGCCGGCACC GAGGCGGCGC TCAGCGCGGA GGCGGACCGC GTCGCGGCCG AGCTGGAAGG CGTGAAGGCA CGGGCCGCGG AGACGGCCCG GCTGCTGGCC GAGGGCCGTA CCCGCCGGGC CGGATGGCTG GCCGAGCGCG ACCGGCTGGC CGGCCGTCTG GACGAGGCCC GTGGCGCCGA CCCCACCGTC CAGGCCCGCC GCGACCGCCT CACCGGGGAG GCGTCCCTCC TCGCCGCCGC CCTCACCGCT GCCGTCCGCA CCGCCGAGCT GGAATCCGGC CACCGAGAGG CGGCCGAGAG GACCGATCTC ACCCTGGAGC TGGCGGCACG CGAGCTCCGG GAGGCCGAGC TGGCCCTGGC CAGGCTGCGG GAGTCGGCCG GGGCCGAGCC CGCGCTGGTG GCCGAGGCCG ACCGGATCGC GGCCGAGCAG GGAGAGCTGG AGGAGCGCTC GCGCGAGTTC GCGGTCACGC TGGCCGCCCG CCGTACGGAC GTGGACAGGC TCACCGCCGA GACCGAGCGG CTGACCGCGC GCATCGACGG GGCCCGGGGC GAGGACCCGA CCCTGGCCGC CAGGCTGGAG CGGCTGGCGG ACGAGGCCGA GCTGCTCAAG GAGGCGGTCG AGGCCACCCG GGAGGAGCTG ACCACCGCCA CCGAGCTGGC GGCGGCCCGG GACCGGGCCG AGGCCGCCGT CGCCGAGGCG GGCTTCCTCG GGCCCGACGA CGCCCGCGCG GCGGCCCGCC CTCCCGCCGA GCAGGAGGAG AAGGCCGAAC GGCTCCGCGA GCTCGACAAG GAGCGCGCCG CGGTCGCCGC GGTGCTGGCC GATCCGGAGC TGATCGCCGC CGCGGCCGAG GACGAGCCCG ACCTCGACGC TCTGCAGCGC GCGCGGGACG CCGCCGACGC GGCCCACGCC GGCCTGCTCT CCGCCCGGCA CCAGGCCGAG ACCCGCCGGG CCCGGCTGGC CGCGCTCCGC GCCGAGCTGG CCGAGTGCCT GGAGCGCTGG CTGCCCGCCG CCGGACGGCA CCGCCTCGCC GACCGGCTCG CGGCCCTCAC GGGGGGAAAC TCCACCGACA ACCAGTGGAA CATGCGGCTG TCGTCCTACG TGCTCGGCGA GCGCCTGCGC CAGGTGGTCG AGTCGGCCAA CGAGCGGCTC GACCACATGT CGGGCGGACG CTACCTCCTC GAACACCACC TCAGCCGTTC GGCGGGAGAC CGGAGCAAGT CGGGCGGAGG GCTCGGCCTG CGGATCCTGG ACGGCTGGAC CGGGGTGGAC CGCGATCCGG CCACCCTGTC CGGCGGCGAG AGCTTCGTCA CCTCGCTGGC GCTCGCCCTC GGCCTGGCCG ACGTGGTGAC CGCCGAGGCC GGGGGAGTGG AGCTCGGCAC GCTCTTCGTC GACGAGGGCT TCGGCACCCT GGACGAGGAC ACCCTCGACG GGGTGCTCGA CATCCTCGAC GGCCTGCGCG ACGGCGGCCG GGCCGTCGGC ATCGTCAGCC ACGTCGCCGA GCTGCGCACC CGCGTCCCCG CCCAGCTGCG GGTCCGCAAG GAACGCCACG GCTCCACCCT GTCCACGGTC ACCTGA
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Protein sequence | MRPHRLWISA FGSFPAEEEV DFDALAEAGL FLIHGPTGAG KTTVLDALCY ALYGRVPGKR DSAKSLRCDH APPGRGPSVA LEVTIRGRRL KITRSPAWQR PKLRGTGTTR ENEKALLQEL TPSGEWTGLT TRVDEAGELI GTLLGMNAEQ FFQVAMLPQG DFAKFLRADG EDRRRVLERL FSVRIYAAAE SWLADRRTEA HREQQALRKE VDFAVKRLEE AAGPGLLASL AGAASPQPPG SAEAGAAGLF ELPEGDAGPS AVAVSAEDDP LEWARTLEEL AAEEVAGMSR GHGEGEEAVR QARARLAHGV ALAERRRRHA EALTRSRALE ESAEERADLE TILAEAARAD RVLPLIQAAE QRAEAAAKAH RLAADAVARA LPLLRDGRDT TPDRLATLER DRHREITRLG ELRAEESRLA KILQDREESG REITGLTAAQ AGTDARLAVL PGLRRDVDAR LTAARLDAAR IPAAESAGEG AAARLRAAEH RDGLAAALAA ARHDLAARLR ALPALADGAG VPAVREGAEV RELLASWERE RREESAGLEG LRADEARLAE LAGLLAALDV ELREAAGQES ALREAQEALP AALADASARL AAVRAQAAGI PAAQAAADAA AAGLDAARRR DALRVELESA RAAQTEATDH AQRLRDRHLD LRQARIDGMA AELALKLAPG EPCAVCGSPD HPAPAAPADA APTAEDERAA QSAYDTATDR RRTAESAVAA LASRLEEALA VAGELGADHA REALAEAGRE LAALTAAAGT EAALSAEADR VAAELEGVKA RAAETARLLA EGRTRRAGWL AERDRLAGRL DEARGADPTV QARRDRLTGE ASLLAAALTA AVRTAELESG HREAAERTDL TLELAARELR EAELALARLR ESAGAEPALV AEADRIAAEQ GELEERSREF AVTLAARRTD VDRLTAETER LTARIDGARG EDPTLAARLE RLADEAELLK EAVEATREEL TTATELAAAR DRAEAAVAEA GFLGPDDARA AARPPAEQEE KAERLRELDK ERAAVAAVLA DPELIAAAAE DEPDLDALQR ARDAADAAHA GLLSARHQAE TRRARLAALR AELAECLERW LPAAGRHRLA DRLAALTGGN STDNQWNMRL SSYVLGERLR QVVESANERL DHMSGGRYLL EHHLSRSAGD RSKSGGGLGL RILDGWTGVD RDPATLSGGE SFVTSLALAL GLADVVTAEA GGVELGTLFV DEGFGTLDED TLDGVLDILD GLRDGGRAVG IVSHVAELRT RVPAQLRVRK ERHGSTLSTV T
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