Gene Sros_6428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6428 
Symbol 
ID8669737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7039172 
End bp7040314 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content68% 
IMG OID 
Productmagnesium/cobalt transporter CorA 
Protein accessionYP_003341885 
Protein GI271967689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00820748 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCTGATC GGCGGGTGCG GGGTATGCGG AGCCTGATGC GCGGGCGTTC CGGAGCGGTG 
CGGGACTCTC CCGAGCGGTC GATGGACCCG CGCTCCGCCG GCGACGAGCC GCCTTCGCCC
CGGTCGCACG TCATCGACAA CGCGATCTAC GTGAACGGGC GGCGGACGGC CACCCCCGGA
TCGCTGCCCG AGGCGTTCGA GTGCCTGAAG AACACCCCCG ACAGCATGGC CTGGATCGGC
TTCTACCGGC CCGAGGACGC GGTGATCCTC AACGTGGCGG AGGAGTTCGA CCTGCACGAG
CTGGCGGTCG AGGACGCCAT CGTCGCCCAC CAGCGGCCCA AGGCCGACCG CTACGGGGAC
ACGCTGTTCG TGGTGCTCCG CCCGGCCAGA TACGTCGACG AGGCCGAGGA GGTCGACTTC
GGTGAGCTGC ACCTCTTCGT CGGCCGGAAC TTCGTGATCA CCGTACGGCA CAGCGAGGCC
CCCGACCTGT CCCAGGTCCG CCGGCGGATG GAGGGCGATC CCGAGCTGCT CGGCCAGGGC
CCGCAGGCGG TGCTCTACGC CATCATGGAC GCGGTCGTGG ACGGCTACGC CCCGGTCGTC
GCCGGCCTGC AGAACGACAT CGACGAGATC GAGGTCCAGG TCTTCGGCAA CGAGCCCGGC
GTCTCCCGCC GCATCTACGA GCTCTCGCGC GAGGTGATCG AGTTCCAGCG GGCCACGGGG
CCGCTGCTCG GCATGATCGA GGGATTCATC GCGGGGGCGG CCAAGTACGG GGTGGACCAG
GAGCTGCAGA GATACCTGCG CGACGTCGCC GACCACGCGA TCACCGTGGC GGAGCGGGTC
AGCGGCTTCC GCCAGATGCT CCACGACATC CTCGTGGTCA ACTCGACCAT GGTCGCCCAG
GCCCAGAACG AGCACATGAC CAATCTCACC GAGGCCAGCA ACGCCCAGAA CGAGGAGGTC
AAGAAGATCT CCGCCTGGGC CGCCATCCTG TTCGCCCCCA CCCTCGTCGG CACCATCTAC
GGCATGAACT TCGACGACAT GCCCGAGATC CACTGGGATC TGGGCTACCC GTTCGCGGTG
CTGCTGATGG CGGGCGTCTG CACGACCCTG TACGTGGTGT TCAAGCGCCG GGACTGGCTG
TAG
 
Protein sequence
MADRRVRGMR SLMRGRSGAV RDSPERSMDP RSAGDEPPSP RSHVIDNAIY VNGRRTATPG 
SLPEAFECLK NTPDSMAWIG FYRPEDAVIL NVAEEFDLHE LAVEDAIVAH QRPKADRYGD
TLFVVLRPAR YVDEAEEVDF GELHLFVGRN FVITVRHSEA PDLSQVRRRM EGDPELLGQG
PQAVLYAIMD AVVDGYAPVV AGLQNDIDEI EVQVFGNEPG VSRRIYELSR EVIEFQRATG
PLLGMIEGFI AGAAKYGVDQ ELQRYLRDVA DHAITVAERV SGFRQMLHDI LVVNSTMVAQ
AQNEHMTNLT EASNAQNEEV KKISAWAAIL FAPTLVGTIY GMNFDDMPEI HWDLGYPFAV
LLMAGVCTTL YVVFKRRDWL