Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6406 |
Symbol | |
ID | 8669715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 7012513 |
End bp | 7014474 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | putative amino acid transporter |
Protein accession | YP_003341863 |
Protein GI | 271967667 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0299299 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGGGTG GGGGCCCGGA CGGGACGCGG GGCGGGGTGG GGGTGGAAGG CGGCCGTCCG AGGGGGCGGC TGTCGCGGTG GCTGCTGGCG GAGCCCTCCG CGAAGGCCCG GACGGCCCCA CGCGAGGAGC ATCCGTGGTG GCGCGTCATG TGCCTCACCG GTGTGGACTA CTTCTCGACC CTGGGCTACC AGCCCGGAAT CGCCTTCCTG GCCGCGGGTG TCCTGTCCCC GATCGCCACG CTGGTCCTGG TCGCGGTGAC GCTGCTGGGC GCGCTGCCGA TCTATCGCCG CGTCGCGGAG GAGAGCCCGC ACGGGCAGGG GTCCATCGCC ATGCTCCAGC ACCACCTGCC CCGGTGGCGG GGCAAGCTCC TGGTGCTGGT CCTGCTCGGC TTCATGGCGA CCGATTTCAT CATCACCATC ACGCTGTCGG CCGCGGACGC CACCGCCCAC GTCATCGAGA ACCCCTTCGC CCCGCACCTC CTGGACGGGC ACCGCATCGG CCTCACGCTG CTGTTCATCA TGTTGCTCGC CGGGGTCTTC CTGGGCGGGT TCAGCGAGGC CATCGGCATC GCGGTGGGCC TGGTGGGCGT CTACCTGACG CTCAACCTGA TCATCGTGGT GACGTCCGCG CAGCACCTTC TCGCCCGGCC CGAGACCGTG GTCCACTGGG AGAACGCGCT GACCGCGCAG TACTCCAGCC CGCTGGTCAT GATCGGCGTG GCGCTGCTGG TCTTCCCGAA GCTCGCGCTG GGGCTGTCGG GCTTCGAGAC GGGTGTCGCC GTGATGCCCC TGGTGCGGGG ATCGCAGGAC GACGATCCCG AGCGTCCGGC AGGCCGGATC AGGGGGACCA GGCGCCTGCT CACCGTTGCC GCGTCGATCA TGAGCTTCTT CCTCATCGCC AGCAGCCTCG TCACGGCCAT GCTCATCCCC GCCGGGGAGT TCCAGACGGG CGGGCGGGCC AACGGCCGCG CCCTCGCCTA CCTCGCCCAC GAACATCTCG GGGAGGTCTT CGGCACCTTC TACGACGTCA GTACGATCAC CATCCTGTGG TTCGCCGGCG CGTCGGCCAT GGCCGGCCTG CTGTCGATCG TGCCGCGTTA CCTGCCCCGG TACGGCATGG CACCGCAGTG GGCGTCCGCG ACCCGCCCCC TCGTGATCCT CCTCACCGCT GTCGCGTTCG CCATCACGAT CATCTTCAGG GCCGACGTCG ACGCCCAGGG CGGGGCCTAT GCCACGGGCG TGCTGGTCGT GATCCTCTCC GCCGCCCTGG CCGTCACCCT GTCCGCCCGT TCCCGGGGCG ACCGCAGGGG GGTGGCCGTG TTCGGGGTGA TCACACTGGT GCTCGCCTAC ACCACGGTCG CCAACATCTT CGAGCGTCCC GAAGGCATCA AGATCGCGTC GTTCTTCATC ACGACGATCA TCGTCGTGTC CTTCGTCTCG CGGGCCAGCC GGTCCCTCGA ACTCCGGGTG GACGAGGTCG GGCTCGATCC CCGGGCGCGG TCGTTCGCCG AGGAGGCCGC CGCGTCGGGA CGACTTCTGC TGATCGCCGA CAACCCGGAC GACAGGGATC ATCTCGGCTA CCGGGAGAAG GAGAGGCGCG CCCGCAAGCT GCACCATCTG CCCGGGGACG CCCCAGTGGT CTTCCTGGAG GTGACGGTGA CCGACGCCTC GGAGTTCAGC ACCAAGCTCC TGGTCAGGGG CGAGGAGCGG GACGGCGGCC ACCGCGTCCT CACCGTCCGG AGCCCCGCGG TCGCCAACGC GATCGCCGCC ATCCTGCTCC ACCTGCGAGA CCGCACCGGT CTCATCCCGC AGGTCTACTT CCACTGGGCC GAGGGCAACC CGGTGATGGC CCTGCTCGGC TATCTCGTCC TCGGCGGGGG CGACGTCCCG CCGCTGACCC GGGAGATCCT CCGGCGGGCC GAACCCCGCC CGGACCGTCG GCCGCAGGTC CACGTCGGCT GA
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Protein sequence | MVGGGPDGTR GGVGVEGGRP RGRLSRWLLA EPSAKARTAP REEHPWWRVM CLTGVDYFST LGYQPGIAFL AAGVLSPIAT LVLVAVTLLG ALPIYRRVAE ESPHGQGSIA MLQHHLPRWR GKLLVLVLLG FMATDFIITI TLSAADATAH VIENPFAPHL LDGHRIGLTL LFIMLLAGVF LGGFSEAIGI AVGLVGVYLT LNLIIVVTSA QHLLARPETV VHWENALTAQ YSSPLVMIGV ALLVFPKLAL GLSGFETGVA VMPLVRGSQD DDPERPAGRI RGTRRLLTVA ASIMSFFLIA SSLVTAMLIP AGEFQTGGRA NGRALAYLAH EHLGEVFGTF YDVSTITILW FAGASAMAGL LSIVPRYLPR YGMAPQWASA TRPLVILLTA VAFAITIIFR ADVDAQGGAY ATGVLVVILS AALAVTLSAR SRGDRRGVAV FGVITLVLAY TTVANIFERP EGIKIASFFI TTIIVVSFVS RASRSLELRV DEVGLDPRAR SFAEEAAASG RLLLIADNPD DRDHLGYREK ERRARKLHHL PGDAPVVFLE VTVTDASEFS TKLLVRGEER DGGHRVLTVR SPAVANAIAA ILLHLRDRTG LIPQVYFHWA EGNPVMALLG YLVLGGGDVP PLTREILRRA EPRPDRRPQV HVG
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