Gene Sros_6375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6375 
Symbol 
ID8669684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6983913 
End bp6984608 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative short chain dehydrogenase 
Protein accessionYP_003341836 
Protein GI271967640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.930619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA ACGGCGCGAT CGCGGTCATC ACCGGCGCGA ACCGGGGTCT GGGACGTCAC 
CTGGCGACTC AGCTGCTGGA GCGCGGAGCA TCGGTCTATG CGGCAGTACG CCGCCCTGAC
GAGCTGGACC TGCCAGGCAC CACTCCGCTC CGGCTCGACG TCACCGACCA CGAATCAATC
CGGGCCGCCG CTCAGATCGC CACCAACGCG AACCTTCTGA TCAACAACGC CGGGATCTCC
ACCGGCACGC CGCTGATCGC CGGCAACATC GACACGGTGC GCCGGGAACT GGAGACGAAC
TTCTACGGCC CCCTTGCCGT CACACGGGCG TTCGCGCCGG TCATCGAGGC CAACGGCGGC
GGCGCGATCC TGAACATCCT GTCGGTGATC TCGTGGATGC ACCCGGCACG GGCCGGGGCG
TACGCGGCAG CCAAGGCCGC CGCATGGGCC CTGACCAACG CAGCCCGCGA GGAACTCCAG
CCCCGAGGAA TCAGCGTCTC GGCGCTCCAC GTCGGCTTCA TGGACACCGA CATGACCGCC
GGGATGCCCG GCGTCCCGAA GGCCGACCCC GCCGACGTCG CCGCCCAGGC ACTCGACGGT
CTCGCCGAGA GCCAGCCGGA AATCCTGGCC GACGATCTCA CCCGCCAGGT CCGCCAGGGC
CTGGCACAGG GCCCCGTTCC GGCTCGCCTC GCCTAA
 
Protein sequence
MELNGAIAVI TGANRGLGRH LATQLLERGA SVYAAVRRPD ELDLPGTTPL RLDVTDHESI 
RAAAQIATNA NLLINNAGIS TGTPLIAGNI DTVRRELETN FYGPLAVTRA FAPVIEANGG
GAILNILSVI SWMHPARAGA YAAAKAAAWA LTNAAREELQ PRGISVSALH VGFMDTDMTA
GMPGVPKADP ADVAAQALDG LAESQPEILA DDLTRQVRQG LAQGPVPARL A