Gene Sros_6351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6351 
Symbol 
ID8669660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6956562 
End bp6959336 
Gene Length2775 bp 
Protein Length924 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341815 
Protein GI271967619 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCAGCA GAGGCAGAGG CGTCGGCAAA CGCCTTCTCG CGATAGTGCC CGTGGTCGGC 
CTGGCCGCCG CGGGACTGGC GATGGGCGGT ACGTCGGCGG AGGCCGACAC CTCGGCCGCG
CGGTATCAGC CGACCGCGGC CGACTACTAC ATCAACTACG CGCCCCCGAG GGACGAGCCG
GAGGTCGACG ACCCGGCCGC GCCCGACGCC AAGGCGCGCA AGGTCAGCCC GTCCAAGAAG
CTCCAGCAGA AGTTCACCGG TGGCAACCCC GCCGCCGCGC GGGTGCTGGC CGCCCGCGAG
GCCGAGGCGA TCCGGACCGG GCGCAACCCC GCGGACTTCC TGTTCAAGAA GGCGAAGACC
ACCACGTCGG CCAAGCTGCT CACCTTGCTG GTGGAGTTCG ACGACAAGGC CAACGACGAC
TTCTCCGGCT TCGTCCGCCC GCCGGACGCG CGGAGCGAGG ACCCGGCCGA GTGCGTCACC
GAGCCGCCGG GCACGCTGCT CAACGGCCCG CTGCACAACA AGATCCCCGA CCCCGCGTCG
CTGCCCGCCA AGGACAACAA CAGCTTCTGG GTACCGGACT TCAGCCCCGA GCACTTCAAC
AAGATGCTCT ACAGCAAGGA CGGCATCACC CAGCGCGTCC GCCCCGACCT GACCGACCCC
CGGGACGGGC GCAAGGGCAT CGACATCTCC AAGCACACCA TGAAGAACAT GTACGAGGAG
ATGTCCAAGG GCGCCTACAC GGTCTCCGGG CAGGCGAGCC CGTGGATCAA GGTCCCGCAC
TCCGAGGCCT ACTACGGCGC GCGCGCCTGC GGCAAGGAGA TCCAGGACAT GACCGGCCAC
CCGAGCAACC CGCTCGGCCC CGGCCAGCTC GCCATCGACG CGGTGAACAC CCTGGCCGCC
GCCAACCCGG ACTTCCCCTG GGCCGACTAC GACGTCGAGG ACGTCGCCGA CTCCGACGGC
GACGGCAACT TCGCCGAGCC GGACGGGGTG GTCGACCACC TCGTGCTGGT CCACGCCGGC
AAGGACAAGT CCTCCGACGG CGGCGCCGAG GGCCCCTACG CGATCTGGGC GCACTCCAGC
GCGGTCGCGG GCGGCTACCA GGTCCCCGGC AAGAGCGTGA AGATCTCCAA CTACATCGTG
CAGCCGGAGG ACTCCGGCGT CGGCGTCTTC GCCCACGAGT ACGGCCACGA CCTCGGCCTG
CCGGACCTCT ACGACACCAG CGGCCAGGCC TCCTCGGCCG TCGACTTCTG GGACCTGATG
TCCAGCGGCT CGCACAGCGG CCCGATCTTC CAGTCGATGC CGACCCACAT GGGTCTGTGG
GACAAGTGGA TCCTCGGCTG GGCCAACCCC AAGGTCTTCA ACCCCGGTGA CCGCGCCCGC
GCGGTGACGG TGGGCCAGAC CTCGCGCACG CCCAAGTTCA CCGAGGACGG CCTCCGGGTC
AACCTGACCA GCGCGCCGCT GGAGATGATC GAGCCGCACA GCGGCACCAA GGCACTCTGG
TCCAACCTCG ACCAGGAGTG GGCCGACTCC AAGATCACTC GTGACGTCCA GGTGCCCGCC
GGGACCGACG TGAAGTTCTG GCTCTGGAAC AACTACGAGA TCGAGGAGGA CTGGGACTTC
GGCTTCGTCG AGGTCTCCGT CGACGGCGGC GCGACCTATG CCCAGCAGAA GGTCTACACC
GAGGGCGGCG CCCTGGTCTC CACCGACGAC GGCTACGGGG ACCCCAACAA GAACCTCGTC
AAGTTCGGCA ACAAGAAGTA CGGCCTCACC GGCAACACCA ACGGCTGGCG GCACGACTAC
GTCGACCTGG CCCCGTTCGC CGGCAAGACC GTCAAGCTCC GGCTGACCTA CGACACCGAC
GCGGCCTTCT CCCCGCGCGG CTGGCACGCC GACGACTTCG CCCTCACCAA CGGCACCCAG
ACCGTCTGGA GCGACGACGT CGAGAGCGGC CTCAACGGCT GGGTGCCGAG CGGTGGCACC
TTCACCAACA CCCACGGCCA GGGCTGGGTC GTCAACGACG GCCAGCGGGA GGTCTCGCGG
TTCTACCTCG CCGAGTGGCG CAACTTCGAC GGCTTCGACA AGGGCCTGCA GTACGCCTAC
GACACCAACT ACTCCCGCGA CGGGGCGTGG AAGGTCGAGA AGTTCAAGTA CAACGCCCCG
GGCCTGCTGG TCTGGTACCG CGACTCGACC TTCACCAACA ACTCGCTGAT CAACAACCTC
GAACTGCCGC CGAGCCTCGG CTCCAAGGGC AGCCTGATGA TCGTCGACTC GCACTACGAG
CCGCTGCGCC GTACCGGTGT GGCGGCGGAG AAGGACGGCG AGCTCAGGGA CAACCTGCAG
GGACGCGTCC AGACCGGCAA CGCGGCCTTC TCCTTCGGCA AGACCTACCC CTTCACCGAG
TGCGTGGAGG CCGCGGGCGA GCCGTTCAGC GAGTACTGCA CCAAGATCGG CACGCAGCGC
GGCGTCACGG AGTTCACCGA CGCCAAGACC TGGTACCCGG GCATGGAGGT CCGCAACGGG
GCGCTCGGCT ACCGCGACTT CGACGCCTCG GTGGTCGTCC CGTCCAAGGG CGACCAGCCC
TACAGCACCC GGGTCGTCAA CGTCGACGGC ACCCCGGCCA CCGAGCTGTA CGGCACCGAC
CTCGGCAACG GCCACGTCCT CGGCACCGGC AACCCCGGCG ACGAGGGCAA GGCCCTGGGC
GTGAAGTTCC AGCTCCTCAC CCCGCTCCCG GGCAACCTCG GCGCGGTCGT CTACGTGACC
CCGCCCAAGC AGTAG
 
Protein sequence
MSSRGRGVGK RLLAIVPVVG LAAAGLAMGG TSAEADTSAA RYQPTAADYY INYAPPRDEP 
EVDDPAAPDA KARKVSPSKK LQQKFTGGNP AAARVLAARE AEAIRTGRNP ADFLFKKAKT
TTSAKLLTLL VEFDDKANDD FSGFVRPPDA RSEDPAECVT EPPGTLLNGP LHNKIPDPAS
LPAKDNNSFW VPDFSPEHFN KMLYSKDGIT QRVRPDLTDP RDGRKGIDIS KHTMKNMYEE
MSKGAYTVSG QASPWIKVPH SEAYYGARAC GKEIQDMTGH PSNPLGPGQL AIDAVNTLAA
ANPDFPWADY DVEDVADSDG DGNFAEPDGV VDHLVLVHAG KDKSSDGGAE GPYAIWAHSS
AVAGGYQVPG KSVKISNYIV QPEDSGVGVF AHEYGHDLGL PDLYDTSGQA SSAVDFWDLM
SSGSHSGPIF QSMPTHMGLW DKWILGWANP KVFNPGDRAR AVTVGQTSRT PKFTEDGLRV
NLTSAPLEMI EPHSGTKALW SNLDQEWADS KITRDVQVPA GTDVKFWLWN NYEIEEDWDF
GFVEVSVDGG ATYAQQKVYT EGGALVSTDD GYGDPNKNLV KFGNKKYGLT GNTNGWRHDY
VDLAPFAGKT VKLRLTYDTD AAFSPRGWHA DDFALTNGTQ TVWSDDVESG LNGWVPSGGT
FTNTHGQGWV VNDGQREVSR FYLAEWRNFD GFDKGLQYAY DTNYSRDGAW KVEKFKYNAP
GLLVWYRDST FTNNSLINNL ELPPSLGSKG SLMIVDSHYE PLRRTGVAAE KDGELRDNLQ
GRVQTGNAAF SFGKTYPFTE CVEAAGEPFS EYCTKIGTQR GVTEFTDAKT WYPGMEVRNG
ALGYRDFDAS VVVPSKGDQP YSTRVVNVDG TPATELYGTD LGNGHVLGTG NPGDEGKALG
VKFQLLTPLP GNLGAVVYVT PPKQ