Gene Sros_6314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6314 
Symbol 
ID8669623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6923408 
End bp6925018 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content69% 
IMG OID 
ProductSSS family solute/sodium (Na+) symporter 
Protein accessionYP_003341781 
Protein GI271967585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.267295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.199401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACC AGACGCTGTC CACGATCCTG TTCCTGCTCT TCGTCGCGGT GACGCTGGGC 
ATCACCTTCA AGGCGAGCCG CAGCAACAAG GACGCCGCCG ACTTCTACGC CGGCGGCCGC
TCCTTCAGCG GCGCGCAGAA CGGCCTGGCG ATCGGCGGCG ACTACATGTC GGCGGCGAGC
TTCCTGGGCA TCGCCGGGAT CATCGCGCTG TCGGGATACG ACGGCTTCCT GTACTCGATC
GGCTTCCTGG TCGCCTGGCT GGTGGCGCTG CTGCTGGTCG CCGAGCTGAT GCGCAACTCC
GGCAAGTTCA CCATGGCCGA CGTCCTGGCC TTCCGGATGA GCCCGCGGCC GGTCCGCACC
GCGGCGGGCG TCTCCACCAT CGTCGTGTCG ATCTTCTACC TGCTGGCCCA GATGGTCGGC
GCGGGCGCGC TGGTCGGCCT GCTGCTCGGC ATCACCTCTC CCCTGGGCAA GGCGCTCACC
ATCGTCGGCG TCGGCCTGCT GATGATCGTC TATGTGGTCG TCGGCGGTAT GAAGGGCACC
ACCTGGGTGC AGATCGTCAA GGCTGTGCTG CTGATGACCG GCGCGACCCT GATCACCCTG
CTGGTGCTCG GCAAGTACGG GTTCAACCTC TCGGCCCTGC TCGGCGACGC CGCCGCGCAG
AGCGGCAAGG GCGACGCGTT CCTCAACGCC GGTGGGAAGT ACGCCACCGA GGCACAGGGC
CTGGCCGGCA AGCTCGACCT GATCAGCCTG GGCCTGGCGC TGGTGCTCGG CACCGCGGGC
CTGCCGCACA TCCTGATCCG CTTCTACACG GTCCCCACCG CCAAGGAGGC CCGAAAGTCG
GTTCTCTGGG GCATCGGCAT CATCGGCGTC TTCTACCTGC TCACCCTCGT GCTGGGCTTC
GGCGCCGCGG CGCTGGTCGG CGGCAAGGCG ATCCTGGCGC AGGACAAGGC GGGCAACACC
GCGGCGCCGA TGCTCGCCGA GGCGATCGGC CAGGCCATCT TCGGCGACGT GGGCGGCACG
ATCCTGCTGG CCGTCATCGC GGCCGTCGCG TTCGCCACGA TCCTGGCGGT GGTCGCCGGT
CTGACGCTGG CCTCCTCCTC CAGCTTCGCC CACGACCTCT ACGCCCACGT GTTCAAGCGC
GGCAACGTCA CCGACAAGGA GGAGGTCCTG GTCGCCAGGA TCTCCGCCTT CGTCATCGGC
GCGGTCGCCA TCGGGCTCGG CATCCTCGCG CAGGGGCAGA ACGTGGCCTT CCTGGTCGCG
CTGGCCTTCG CGGTGGCCGC CTCCGGCAAT CTTCCCGCGA TCCTCTACAG CCTGTTCTGG
AAGAGGTTCA ACACCGCCGG CGCGGTCTCG GCCATCTACG GAGGCCTGGT CTCCGCGCTG
ATCCTGGTGA TCTTCTCGCC GGTCGTGTCG GGCAGTGCCA CCGCGCTGTT CCCGGACGCC
GACTTCGCCT GGTTCCCGCT GAGCAACCCC GGCCTCATCT CGATCCCGAT CGGATTCCTG
GCCGGATTCG TCGGCGCGCG GCTCAGCAAG GAGTACAACC CGGCCAAGTA CGCCGAGATC
GAGGTCCGCT CGCTGACCGG CATCGGCGCG GAGAAGGCCG CCCAGCACTG A
 
Protein sequence
MSHQTLSTIL FLLFVAVTLG ITFKASRSNK DAADFYAGGR SFSGAQNGLA IGGDYMSAAS 
FLGIAGIIAL SGYDGFLYSI GFLVAWLVAL LLVAELMRNS GKFTMADVLA FRMSPRPVRT
AAGVSTIVVS IFYLLAQMVG AGALVGLLLG ITSPLGKALT IVGVGLLMIV YVVVGGMKGT
TWVQIVKAVL LMTGATLITL LVLGKYGFNL SALLGDAAAQ SGKGDAFLNA GGKYATEAQG
LAGKLDLISL GLALVLGTAG LPHILIRFYT VPTAKEARKS VLWGIGIIGV FYLLTLVLGF
GAAALVGGKA ILAQDKAGNT AAPMLAEAIG QAIFGDVGGT ILLAVIAAVA FATILAVVAG
LTLASSSSFA HDLYAHVFKR GNVTDKEEVL VARISAFVIG AVAIGLGILA QGQNVAFLVA
LAFAVAASGN LPAILYSLFW KRFNTAGAVS AIYGGLVSAL ILVIFSPVVS GSATALFPDA
DFAWFPLSNP GLISIPIGFL AGFVGARLSK EYNPAKYAEI EVRSLTGIGA EKAAQH