Gene Sros_6311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6311 
Symbol 
ID8669620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6919396 
End bp6920946 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content75% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003341778 
Protein GI271967582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.836988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.161919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCACG CCCCGGAGCC GGGATCGACC GCAGGCGCAC CCCCGCACCC ACGCCGCTGG 
GCGGGGCTCG GCGTCCTGTC CGCGAGCCTG CTGCTGGTGG TCATGGACAT GACCGTCCTC
AACGTGGCGC TGCCCGCGAT CTCCGCCGAC CTGAGGCCGG ACTCGGTGCA GCTGCTGTGG
ATGGTGGACG TCTACGCGCT CGTGCTGTCC GGGCTGCTGG TCACCCTGAG CGCGCTGGGC
GACCGGTGGG GCCGCAAGCG GATGCTGCTC ACCGGATTCG CGATCTTCGG CCTCGCCTCG
GTCGGGGTGC TGGCGGCCGA CAGCCCCGGC GAGGTGATCG CGGTACGGGC GCTCCTCGGC
ATCGGCGGCG CCATGATCAT GCCGTCCACG CTGTCGATGA TCCGCAGCCT GTTCACCGAC
CCGAGGGAGC GGGCCACCGC GCTGGGCGTC TGGTCGGCCA TGGCCGCGCT CGGCGCCGCG
CTGGGGCCGA TCCTCGGCGG AGCACTGCTG GAGAGGTTCA GCTGGCACGC CGCGTTCCTG
GTGAACGTCC CGGTGATGGC CGCGGCGATC ATCGCGGGGC TCCTGCTGCT GCCCGAGTCC
CGCAACCCGC GTCCGGGCCG CTGGGACGCG GTGGCCACCG TGCTGTCGAT CGTGGGCATG
GTCGCCCTGG TGTGGGCGAT CAAGCACTTC GGCAAGGACG GGCTCGGCGA TCCCGGCGCG
CTGATCGCCC TCGCCGTCGC GGCGGTGACG CTCACCTGGT TCGTCCGGCG CTGCCTCGAC
CGGCCCGATC CGCTGCTGGA GGTCCGCCTG TTCGGCCGTC CCTCCTTCAC CGCGGGCACC
GTCGCGGCGC TGACCACCTC CATCGCGATG GCCGGAATGA TGCTGCTGGT GGCCCAGTGG
ATGCAGCTGG TGCAGGGCTA CTCCCCGCTG GAGACGGGGG TGCGGCTGCT GCCGGCCGCG
GTCGGCGCGG GGCTGCTCTC GCCGCTCGCC CCCAGCCTGG CCGGCCGGCT CGGCCCCCGG
ACGGTGCTGG CCGGAGGTCT CGCCGTCGCC GCGGCCGGGT TCCTCGTGCT TCCCGTCGCA
CCGGCCCCTC TCCCCTACCC GGCCGTGGCC GCGGCGCTCC TCCTGATCGG CGCCGGCATG
GGGTCGCTGG CGATCGCCTC GGCGGTCATC ATGTCCGGCG CGCCGCCTGA GAAGGCCGGC
AGCGCCGCCG CGATCGAGGA GACCAGCTAC GAGCTGGGCG GGGCACTGGG CGTGGCCGTC
CTCGGCAGCG TCGCCGCGGC GGTCTACCGC AACGAGCTCA CGCGGGCCGA GCTGGCCGCG
GGAGGTGTCA CCGGCCAGGC CGCCGAGGTG GTCCGCGAGT CGCTGGGCGG GGCGCTGGAG
GTGACCGGGG CCGTGGGCCG GGCCGGGACC GAGCTGGCCC GCCAGGCCCA GACCGCCTTC
ACCGACTCAC TGGTGGTGAC CGGCGCGGCC GGCGGCGGCC TCATGCTGGC CGCCGCCGTC
GTGGTCTGGC TGCTCACACC GCGCGACATG GACCTGTCCG GCGGGCACTG A
 
Protein sequence
MTHAPEPGST AGAPPHPRRW AGLGVLSASL LLVVMDMTVL NVALPAISAD LRPDSVQLLW 
MVDVYALVLS GLLVTLSALG DRWGRKRMLL TGFAIFGLAS VGVLAADSPG EVIAVRALLG
IGGAMIMPST LSMIRSLFTD PRERATALGV WSAMAALGAA LGPILGGALL ERFSWHAAFL
VNVPVMAAAI IAGLLLLPES RNPRPGRWDA VATVLSIVGM VALVWAIKHF GKDGLGDPGA
LIALAVAAVT LTWFVRRCLD RPDPLLEVRL FGRPSFTAGT VAALTTSIAM AGMMLLVAQW
MQLVQGYSPL ETGVRLLPAA VGAGLLSPLA PSLAGRLGPR TVLAGGLAVA AAGFLVLPVA
PAPLPYPAVA AALLLIGAGM GSLAIASAVI MSGAPPEKAG SAAAIEETSY ELGGALGVAV
LGSVAAAVYR NELTRAELAA GGVTGQAAEV VRESLGGALE VTGAVGRAGT ELARQAQTAF
TDSLVVTGAA GGGLMLAAAV VVWLLTPRDM DLSGGH