| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6223 |
|---|
| Symbol | |
|---|
| ID | 8669528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6833050 |
|---|
| End bp | 6834027 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_003341695 |
|---|
| Protein GI | 271967499 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.945898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.500437 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGA GGATCTCGGC GCTGCTGCTG GCCGGCGCCG TCACGATGAC GATGGCAGGA
TGCGGCGGCG ACGGCGGGTC GGGCGGCTCC GCCGGCGACG GCAAGATCAC GATGGGATTC
TCCCAGGTCG GCGCCGAGAG CGGCTGGCGC ACCGCCAACA CCAAGTCCGT CCAGACGGCT
GCGGAGGCCG CCGGAGTCAC GCTGAAGTTC TCCGACGCGC AGCAGAAGCA GGAGAACCAG
ATCAAGGCCA TCCGCTCCTA CATCCAGCAG AAGGTGGACG TCATCGCCTT CTCGCCGGTC
GTGGAGTCCG GCTGGGACAC CGTGCTCAAG GAGGCCAAGA ACGCCGCTAT CCCGGTCATC
CTCACCGACC GGGCCGTGGA CTCCAAGGAC ACCAGCCTCT ACAAGACCTT CCTCGGCTCG
GACTTCGTCG AGGAGGGCCG CAAGGCCGGC AAATGGCTGA CCGAGGAGTT CAAGGACACC
AAGGATCCGG TGAACATCGT CGAGCTGCAG GGCACCACCG GCTCGGCGCC GGCCAACGAC
CGCAAGGCGG GCTTCGCCGA GGCCATCGGG ACCGACCCCA AGTTCAAGGT GATCGCCTCG
CAGACCGGCG ACTTCACCCG CGCCAAGGGC AAGGAGGTCA TGGAGGCCTT CCTGAAGGCC
AACCCGGACA TCGACGTGCT CTACGCGCAC AACGACGACA TGGGTCTCGG CGCCATCGAG
GCGATCGAGG GCGCGGGCAA GGTGCCCGGC AAGGACATCA AGATCATCAC GATCGACGCC
GTCAAGGACG GCATGCAGGC CCTCGCCGAC GGCAAGATCA GCTACATCGT CGAATGCAGC
CCGCTGCTCG GCCCCCAGCT GATGGACCTG GCCGCGAAGG CCGTCAAGGG GGAGAGCATC
CCGGCCCGCG TCGTGACGGA GGAGACCACC TTCACGCAGG AGCAGGCCAA GGAAGCCCTG
CCGAGCCGCC AGTACTGA
|
|---|
| Protein sequence | MFKRISALLL AGAVTMTMAG CGGDGGSGGS AGDGKITMGF SQVGAESGWR TANTKSVQTA
AEAAGVTLKF SDAQQKQENQ IKAIRSYIQQ KVDVIAFSPV VESGWDTVLK EAKNAAIPVI
LTDRAVDSKD TSLYKTFLGS DFVEEGRKAG KWLTEEFKDT KDPVNIVELQ GTTGSAPAND
RKAGFAEAIG TDPKFKVIAS QTGDFTRAKG KEVMEAFLKA NPDIDVLYAH NDDMGLGAIE
AIEGAGKVPG KDIKIITIDA VKDGMQALAD GKISYIVECS PLLGPQLMDL AAKAVKGESI
PARVVTEETT FTQEQAKEAL PSRQY
|
|---|
| |