| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6219 |
|---|
| Symbol | |
|---|
| ID | 8669524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6827755 |
|---|
| End bp | 6829410 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | ribulokinase |
|---|
| Protein accession | YP_003341691 |
|---|
| Protein GI | 271967495 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGTTA ACAACGAACG TTACGTGGTC GGTGTCGACT TCGGCACGCT GTCGGGCCGC
GCCGTCGTGG TGCGGGTGGC CGACGGCGCC GAGGCCGGCA GCGCCGTGCA CGAGTACGCC
CACCGCGTGA TCGAGGACCG GCTCCCCGGC ACCGGTGCGC GCCTCGGGGC GGACTGGGCG
CTGCAGTCGC CGCAGGACTG GCGTGAGGTG CTGCGCAACG CGGTGCCGGA GGCGCTGGCC
GCCTCGGGGG TCTCCGCGTC GCAGGTCATC GGCATCGGCA CCGACTTCAC CGCCTGCACC
GTGCTGCCCG CCACCGCGCA GGGCCTTCCG CTGTGCGAGC TGCCGGAGCT GAGGGACAGG
CCGCACGCCT GGCCGAAGCT GTGGAAGCAC CATTCGGCGC AGCCGCACGC CGACCGGATC
AACGCCCTCG CCGAGCGGCG GGGCGAGAGC TGGCTGCCCC GCTACGGCGG CCGGATCTCC
TCCGAATGGG AGTTCGCCAA GGGCCTTCAG GTGCTGGAGG AGGACCCCGA GGTGTACGGC
AGGGCCGAGC GCTGGATCGA GGCCGCCGAC TGGATCATCT GGGAACTGAC CGGCGTGGAG
AGCCGCAACG TCTGCACCGC CGGCTACAAG GGCATCCACC AGGACGGGGC CTATCCCGGC
GAGGACTTCC TGGCCGAGCT CAATCCCGCC TTCACCGGTT TCACCGGCAA GCTGGGCCGG
GAACTGTCCC CTCTCGGCGG CCTGGCCGGC CGGCTGACCG CGCGGGCCGC CGGATGGACG
GGGCTCCCCG AGGGACTCGC CGTCGCCGTC GGCAACGTCG ACGCGCACGT CACGGCCGCC
GCCGCGGACG CGGTACGGCC CGGCCAGATG GTCGCCATCA TGGGCACCTC GACCTGCCAC
GTCATGCCGT CCGACCGGCT CGCCGAGGTG CCGGGCATGT GCGGCGTGGT CCGTGACGGC
ATCGTGCCGG GGCTGTGGGG CTACGAGGCG GGCCAGTCGG GCGTCGGCGA CGTCTTCGCC
TGGTTCGTCG AGACCTCGGT GCCCGCCTCC TACTCGCGGG AGGCCGGCAG CCGCGGCATC
ACCGTGCACG AGTATCTCAC CGAGCTGGCC GCCGCCCAGA AGGTCGGCGC GCACGGGCTG
GTCGCGCTGG ACTGGCACAA CGGCAACCGC TCGGTGCTGG TCGACCACAA CCTCTCCGGG
ATGGTCGTCG GCCAGACGCT CGCGACCAGG CCCGAGGACA CCTACCGGGC GCTCATCGAG
GCCACCGCGT TCGGCGCCCG CGTGATCGTG GAGGCGTTCG AGGCCGCGGG GGTGCCGGTG
GAGGAGTTCG TCGTCGCCGG CGGGCTGCTG AAGAACCGGT TCCTCATGCA GGTCTACGCC
GACGTGCTGC GCCGCCCGCT GTCGGTGATC GGCTCCGACC AGGGACCGGC GCTCGGCTCG
GCGATCCACG CGGCGGTCGC CGCGGGCGCC TACGAGGACG TCACCGCGGC CGCCGCCGCC
ATGGGCAAGC GCACCGAGGC GGCCTACGTG CCCGACGCCG GGCGGGCGGA CGCCTACGAC
CGGCTGTACG CCGAATACCG CAACCTGCAC GACCACTTCG CGGACGGTGC GCTGCTGCAC
CGGCTCCGCG CCATCCGGAA CGAGGGGATC GCATGA
|
|---|
| Protein sequence | MNVNNERYVV GVDFGTLSGR AVVVRVADGA EAGSAVHEYA HRVIEDRLPG TGARLGADWA
LQSPQDWREV LRNAVPEALA ASGVSASQVI GIGTDFTACT VLPATAQGLP LCELPELRDR
PHAWPKLWKH HSAQPHADRI NALAERRGES WLPRYGGRIS SEWEFAKGLQ VLEEDPEVYG
RAERWIEAAD WIIWELTGVE SRNVCTAGYK GIHQDGAYPG EDFLAELNPA FTGFTGKLGR
ELSPLGGLAG RLTARAAGWT GLPEGLAVAV GNVDAHVTAA AADAVRPGQM VAIMGTSTCH
VMPSDRLAEV PGMCGVVRDG IVPGLWGYEA GQSGVGDVFA WFVETSVPAS YSREAGSRGI
TVHEYLTELA AAQKVGAHGL VALDWHNGNR SVLVDHNLSG MVVGQTLATR PEDTYRALIE
ATAFGARVIV EAFEAAGVPV EEFVVAGGLL KNRFLMQVYA DVLRRPLSVI GSDQGPALGS
AIHAAVAAGA YEDVTAAAAA MGKRTEAAYV PDAGRADAYD RLYAEYRNLH DHFADGALLH
RLRAIRNEGI A
|
|---|
| |