| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6198 |
|---|
| Symbol | |
|---|
| ID | 8669500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6801096 |
|---|
| End bp | 6802343 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Signal transduction histidine kinase-like protein |
|---|
| Protein accession | YP_003341670 |
|---|
| Protein GI | 271967474 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.129005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACCC TCCTGCGCCG TATCGGCACG GACAGCCGGT ATCTGATCGC CGGCTTCCCC
CTCTCCGTCG TCTTCTTCGT CCTGATGGTG GCGGGCTTCG CCGCCGGGAT CGGCACGGTG
GTCGTGTGGG TGGGGCTGCC GGTCCTGGCG ACGACGCTGC TGGTGGCACG GGGCATGGCC
GATGTGGAAC GGCGGATGCT GCCCGAGGTG CTCGGCCGCG CGCTGCCCCG CCCCCGCTAC
CGGCCGGCGC CGGAGACGGC CGGATGGTTC CGCCGCATGG TGAACCCCCT GACCAGCGGC
CAGTCGTGGC TCGACCTGCT CTACGGGATC GTGGCCTTCC CGATCTCCGT CGTGACGTTC
GTCTTCACGG TGACCTGGTG GGCCGGGACG ATCCTGGGCC TGGCCACCCC CCTCTACGGA
TGGATCACCG CCGCCATCCC GGGCAACGAG GGGCTGGCCT ACCTGCTCGG GCTCGGGGAC
AGCGTCTGGA TCGACGTGGT CATCAACACC AGCATCGGCG TGCTGTTCGC GCTCACCCTG
CCGGTGGTCG TGCGCAGCGC CGCGCTCATC CGGGCCGGGC TCGGCCGTGC CATGCTGACC
GGCGTCGCCG AGCTGCACGA GCGCATCGAC GACCTCGCCG AGGGCCGGGC CGCCGCGGTG
TCGGCCGAGG CCAACGCGCT GCGGCGGCTG GAGCGCGACA TCCACGACGG GCCGCAGCAG
CGCCTGGTCT CCCTGGCCAT GGACCTGTCA CGGGCCCAGC GCCAGCTCAA GCGCGACCCG
CAGGCGGTCG AGGCGATGCT CAGCCAGGCC ATCACCTCGA CCCGGGACAC CCTGGACGAG
CTGCGCGCGC TCTCCCGCGG CATCGCGCCG CCGATCCTGA CCGACCGCGG CCTGGCCCCG
GCGCTCGCGG CGCTGGCCAG CCGCTGCACC ATCCCCGTCG AGCTGGACGT GCAGGTCACC
GGCCGCTTCG CGGCGGCGGT GGAGAACACC GTCTACTTCG TGGTCGCCGA GAGCCTGACC
AACGTCGCCA AGCACAGCCA CGCCACCGTC TGCACGGTGT CGCTGACCAA GACCGGGGGC
GTCCTGATGC TGACGATCGG GGATGATGGA GTGGGCGGCG CACACGTCGC CAAGGGACAC
GGCCTGTCCG GGCTCGGCGA CCGCCTCAAG GCGGTCGACG GGGAGCTCGC GGTGGACTCA
CCGGTGGGCG GGCCGACAGT GATCGTGGCG GAGGTGCCGT GCGGGTAG
|
|---|
| Protein sequence | MRTLLRRIGT DSRYLIAGFP LSVVFFVLMV AGFAAGIGTV VVWVGLPVLA TTLLVARGMA
DVERRMLPEV LGRALPRPRY RPAPETAGWF RRMVNPLTSG QSWLDLLYGI VAFPISVVTF
VFTVTWWAGT ILGLATPLYG WITAAIPGNE GLAYLLGLGD SVWIDVVINT SIGVLFALTL
PVVVRSAALI RAGLGRAMLT GVAELHERID DLAEGRAAAV SAEANALRRL ERDIHDGPQQ
RLVSLAMDLS RAQRQLKRDP QAVEAMLSQA ITSTRDTLDE LRALSRGIAP PILTDRGLAP
ALAALASRCT IPVELDVQVT GRFAAAVENT VYFVVAESLT NVAKHSHATV CTVSLTKTGG
VLMLTIGDDG VGGAHVAKGH GLSGLGDRLK AVDGELAVDS PVGGPTVIVA EVPCG
|
|---|
| |